Cluster no. 207

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Cluster is part of supercluster: 149

Cluster characteristics:

size 127
size_real 127
ecount 803
supercluster 149
annotations_summary
pair_completeness 0.336842105263158
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0078740157480315
satellite_probability 1.17646958017996e-20
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S2 35
S1 44
S3 48
comparative analysis - number of edges between species:
S2 S1 S3
S2 49.0 72.5 88.5
S1 72.5 92.0 99.0
S3 88.5 99.0 142.0
comparative analysis - observed/expected number of edges between species
S2 S1 S3
S2 0.892 1.050 1.030
S1 1.050 1.060 0.916
S3 1.030 0.916 1.050

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
5350 2 0.0597
4 1 0.000436
12 1 0.000577
13 1 0.000691
20 1 0.00327
23 1 0.00122
33 1 0.00111
37 1 0.00087
44 1 0.00118
90 1 0.00231
340 1 0.0206
1180 1 0.027
3340 1 0.0299
13200 1 0.0312
15900 1 0.0308
32500 1 0.0308
35500 1 0.0308
36100 1 0.0308
45200 1 0.0308
46500 1 0.0308
49900 1 0.0308