Cluster no. 203
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Cluster is part of supercluster: 145
Cluster characteristics:
| size |
134 |
| size_real |
134 |
| ecount |
508 |
| supercluster |
145 |
| annotations_summary |
|
| pair_completeness |
0.472527472527473 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00746268656716418 |
| satellite_probability |
8.64741555314371e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
35 |
| S1 |
46 |
| S3 |
53 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
43.0 |
50.5 |
56.0 |
| S1 |
50.5 |
50.0 |
63.5 |
| S3 |
56.0 |
63.5 |
75.0 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
0.977 |
1.050 |
0.978 |
| S1 |
1.050 |
0.944 |
1.010 |
| S3 |
0.978 |
1.010 |
1.010 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 11 |
17 |
0.0135 |
| 68 |
6 |
0.00924 |
| 662 |
3 |
0.0923 |
| 5640 |
2 |
0.0769 |
| 13 |
1 |
0.000695 |
| 194 |
1 |
0.0109 |
| 5730 |
1 |
0.0385 |
| 19500 |
1 |
0.04 |
| 27600 |
1 |
0.04 |
| 33600 |
1 |
0.04 |
| 41800 |
1 |
0.04 |
| 50400 |
1 |
0.04 |
|
CL203 ----> CL11
No. of shared pairs: :17