Cluster no. 201
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Cluster is part of supercluster: 143
Cluster characteristics:
| size |
138 |
| size_real |
138 |
| ecount |
323 |
| supercluster |
143 |
| annotations_summary |
|
| pair_completeness |
0.210526315789474 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0072463768115942 |
| satellite_probability |
9.58585004034497e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
42 |
| S1 |
52 |
| S3 |
44 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
32.0 |
38.5 |
27 |
| S1 |
38.5 |
44.0 |
42 |
| S3 |
27.0 |
42.0 |
32 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
1.090 |
1.020 |
0.886 |
| S1 |
1.020 |
0.917 |
1.080 |
| S3 |
0.886 |
1.080 |
1.010 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 320 |
3 |
0.0432 |
| 660 |
3 |
0.0561 |
| 749 |
3 |
0.0566 |
| 4350 |
2 |
0.0421 |
| 38 |
1 |
0.00102 |
| 72 |
1 |
0.00259 |
| 80 |
1 |
0.00127 |
| 90 |
1 |
0.00224 |
| 153 |
1 |
0.00722 |
| 247 |
1 |
0.0131 |
| 1200 |
1 |
0.0198 |
| 2380 |
1 |
0.0213 |
| 3210 |
1 |
0.0208 |
| 47800 |
1 |
0.0217 |
|