Cluster no. 192
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Cluster is part of supercluster: 134
Cluster characteristics:
| size |
161 |
| size_real |
161 |
| ecount |
537 |
| supercluster |
134 |
| annotations_summary |
|
| pair_completeness |
0.57843137254902 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0062111801242236 |
| satellite_probability |
4.44676966830506e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
60 |
| S1 |
40 |
| S3 |
61 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
81.0 |
50 |
75.5 |
| S1 |
50.0 |
29 |
48.0 |
| S3 |
75.5 |
48 |
80.0 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
1.020 |
1.020 |
0.965 |
| S1 |
1.020 |
0.966 |
0.997 |
| S3 |
0.965 |
0.997 |
1.040 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 108 |
9 |
0.0957 |
| 561 |
4 |
0.14 |
| 1160 |
3 |
0.115 |
| 5970 |
2 |
0.0851 |
| 7640 |
2 |
0.0889 |
| 7790 |
2 |
0.0851 |
| 30500 |
2 |
0.0889 |
| 18 |
1 |
0.000531 |
| 25 |
1 |
0.00113 |
| 42 |
1 |
0.000965 |
| 877 |
1 |
0.037 |
| 2170 |
1 |
0.0408 |
| 16100 |
1 |
0.0444 |
| 23500 |
1 |
0.0444 |
|