Cluster no. 191
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Cluster is part of supercluster: 133
Cluster characteristics:
| size |
162 |
| size_real |
162 |
| ecount |
280 |
| supercluster |
133 |
| annotations_summary |
|
| pair_completeness |
0.10958904109589 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00617283950617284 |
| satellite_probability |
5.78701199902643e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
51 |
| S1 |
63 |
| S3 |
48 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
31.0 |
23.5 |
30.0 |
| S1 |
23.5 |
41.0 |
35.5 |
| S3 |
30.0 |
35.5 |
30.0 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
1.220 |
0.779 |
1.040 |
| S1 |
0.779 |
1.150 |
1.040 |
| S3 |
1.040 |
1.040 |
0.921 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 32 |
5 |
0.00417 |
| 377 |
3 |
0.0366 |
| 11 |
2 |
0.00154 |
| 12100 |
2 |
0.0301 |
| 48 |
1 |
0.00173 |
| 79 |
1 |
0.00228 |
| 102 |
1 |
0.00823 |
| 114 |
1 |
0.00284 |
| 175 |
1 |
0.00735 |
| 215 |
1 |
0.012 |
| 922 |
1 |
0.0139 |
| 1540 |
1 |
0.0142 |
| 1690 |
1 |
0.0145 |
| 11400 |
1 |
0.015 |
| 42900 |
1 |
0.0152 |
|