Cluster no. 190

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Cluster is part of supercluster: 132

Cluster characteristics:

size 162
size_real 162
ecount 873
supercluster 132
annotations_summary 95.68% organelle/plastid
3.09% organelle/mitochondria
pair_completeness 0.840909090909091
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00617283950617284
satellite_probability 2.08600566460412e-22
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S2 46
S1 57
S3 59
comparative analysis - number of edges between species:
S2 S1 S3
S2 69 71 110
S1 71 103 99
S3 110 99 140
comparative analysis - observed/expected number of edges between species
S2 S1 S3
S2 0.960 0.906 1.100
S1 0.906 1.210 0.906
S3 1.100 0.906 1.000

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
mitochondria mitochondria 5 0.031
plastid plastid 155 0.957

clusters connected through mates:

Cluster Number of shared
read pairs
k
349 7 0.483
950 3 0.273
925 1 0.0714