Cluster no. 182
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Cluster is part of supercluster: 124
Cluster characteristics:
| size |
182 |
| size_real |
182 |
| ecount |
1155 |
| supercluster |
124 |
| annotations_summary |
|
| pair_completeness |
0.421875 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00549450549450549 |
| satellite_probability |
1.0345154302985e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
59 |
| S1 |
48 |
| S3 |
75 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
189 |
111 |
162 |
| S1 |
111 |
71 |
107 |
| S3 |
162 |
107 |
136 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
1.020 |
0.961 |
0.999 |
| S1 |
0.961 |
0.982 |
1.060 |
| S3 |
0.999 |
1.060 |
0.960 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 31 |
37 |
0.0298 |
| 26 |
29 |
0.024 |
| 5 |
4 |
0.00183 |
| 34 |
1 |
0.00321 |
| 74 |
1 |
0.00101 |
|
CL182 ----> CL31
No. of shared pairs: :37
CL182 ----> CL26
No. of shared pairs: :29