Cluster no. 170
Go back to cluster table
Cluster is part of supercluster: 112
Cluster characteristics:
| size |
202 |
| size_real |
202 |
| ecount |
433 |
| supercluster |
112 |
| annotations_summary |
|
| pair_completeness |
0.565891472868217 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00495049504950495 |
| satellite_probability |
1.13992396794032e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
65 |
| S1 |
55 |
| S3 |
82 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
47.0 |
40 |
58.5 |
| S1 |
40.0 |
34 |
44.0 |
| S3 |
58.5 |
44 |
67.0 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
0.961 |
1.010 |
1.030 |
| S1 |
1.010 |
1.060 |
0.953 |
| S3 |
1.030 |
0.953 |
1.010 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 12800 |
3 |
0.102 |
| 15800 |
2 |
0.069 |
| 3 |
1 |
0.000635 |
| 9 |
1 |
0.000798 |
| 33 |
1 |
0.00112 |
| 39 |
1 |
0.000931 |
| 55 |
1 |
0.00295 |
| 2630 |
1 |
0.0328 |
| 2790 |
1 |
0.0351 |
| 5350 |
1 |
0.0345 |
| 13200 |
1 |
0.0339 |
| 21800 |
1 |
0.0345 |
| 48200 |
1 |
0.0345 |
| 49100 |
1 |
0.0345 |
|