Cluster no. 168

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Cluster is part of supercluster: 110

Cluster characteristics:

size 203
size_real 203
ecount 876
supercluster 110
annotations_summary 95.57% organelle/plastid
pair_completeness 0.87962962962963
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00492610837438424
satellite_probability 4.91298606542926e-24
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S2 70
S1 82
S3 51
comparative analysis - number of edges between species:
S2 S1 S3
S2 94 130 76
S1 130 143 90
S3 76 90 46
comparative analysis - observed/expected number of edges between species
S2 S1 S3
S2 0.912 1.050 1.050
S1 1.050 0.948 1.020
S3 1.050 1.020 0.897

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
plastid plastid 194 0.96

clusters connected through mates:

Cluster Number of shared
read pairs		 k
308 4 0.333
292 3 0.25
5 1 0.000463
94 1 0.0222