Cluster no. 159
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Cluster is part of supercluster: 102
Cluster characteristics:
| size |
220 |
| size_real |
220 |
| ecount |
2865 |
| supercluster |
102 |
| annotations_summary |
|
| pair_completeness |
0.456953642384106 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00454545454545455 |
| satellite_probability |
3.90603663686178e-21 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
64 |
| S1 |
63 |
| S3 |
93 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
244 |
238 |
367 |
| S1 |
238 |
214 |
327 |
| S3 |
367 |
327 |
544 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
0.971 |
1.030 |
1.000 |
| S1 |
1.030 |
1.010 |
0.972 |
| S3 |
1.000 |
0.972 |
1.020 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 2 |
31 |
0.0139 |
| 26 |
24 |
0.0198 |
| 31 |
6 |
0.00482 |
| 3040 |
5 |
0.114 |
| 13600 |
3 |
0.0706 |
| 7 |
1 |
0.000457 |
| 51 |
1 |
0.00266 |
| 107 |
1 |
0.00491 |
| 31700 |
1 |
0.0238 |
|
CL159 ----> CL2
No. of shared pairs: :31
CL159 ----> CL26
No. of shared pairs: :24