Cluster no. 157

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Cluster is part of supercluster: 100

Cluster characteristics:

size 234
size_real 234
ecount 368
supercluster 100
annotations_summary
pair_completeness 0.175879396984925
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00427350427350427
satellite_probability 1.62357903081748e-20
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S2 86
S1 79
S3 69
comparative analysis - number of edges between species:
S2 S1 S3
S2 64.0 44.5 38.5
S1 44.5 33.0 31.0
S3 38.5 31.0 43.0
comparative analysis - observed/expected number of edges between species
S2 S1 S3
S2 1.090 1.030 0.857
S1 1.030 1.030 0.935
S3 0.857 0.935 1.250

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs		 k
97 23 0.0467
473 7 0.0714
679 4 0.044
25 1 0.00105
80 1 0.00121
356 1 0.0104
2000 1 0.0117
4630 1 0.0118
5500 1 0.0119
25600 1 0.012
25800 1 0.012
30100 1 0.012
38100 1 0.012
44000 1 0.012
44400 1 0.012

CL157 ----> CL97

image

No. of shared pairs: :23