Cluster no. 156
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Cluster is part of supercluster: 99
Cluster characteristics:
| size |
234 |
| size_real |
234 |
| ecount |
899 |
| supercluster |
99 |
| annotations_summary |
|
| pair_completeness |
0.206185567010309 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00427350427350427 |
| satellite_probability |
1.5718759856987e-20 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
72 |
| S1 |
73 |
| S3 |
89 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
80 |
90.0 |
120.0 |
| S1 |
90 |
66.0 |
97.5 |
| S3 |
120 |
97.5 |
139.0 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
0.858 |
1.100 |
1.040 |
| S1 |
1.100 |
0.923 |
0.971 |
| S3 |
1.040 |
0.971 |
0.986 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 2 |
64 |
0.0283 |
| 7 |
61 |
0.0274 |
| 18 |
1 |
0.000516 |
| 49 |
1 |
0.00154 |
| 60 |
1 |
0.00204 |
| 12900 |
1 |
0.0127 |
| 18200 |
1 |
0.0128 |
|
CL156 ----> CL2
No. of shared pairs: :64
CL156 ----> CL7
No. of shared pairs: :61