Cluster no. 151

Cluster no. 151

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Cluster is part of supercluster: 94

Cluster characteristics:

size	259
size_real	259
ecount	819
supercluster	94
annotations_summary
pair_completeness	0.363157894736842
pbs_score	None
TR_score	None
TR_monomer_length	None
loop_index	0.00386100386100386
satellite_probability	8.64114621709583e-21
consensus	None
TAREAN_annotation	Other
orientation_score	1

comparative analysis:

Comparative analysis - species read counts:

Species	Read count
S2	60
S1	104
S3	95

comparative analysis - number of edges between species:

	S2	S1	S3
S2	51.0	78	61.5
S1	78.0	168	113.0
S3	61.5	113	95.0

comparative analysis - observed/expected number of edges between species

	S2	S1	S3
S2	1.150	0.934	0.981
S1	0.934	1.070	0.957
S3	0.981	0.957	1.070

protein domains:

No protein domains detected

protein domains:

Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster	Number of similarity hits

3	10
16	7
6	5
79	3
17	1
24	1

clusters connected through mates:

Cluster	Number of shared read pairs	k

3	13	0.00809
16	12	0.007
24	11	0.00945
6	2	0.00134
124	2	0.0103
976	2	0.0299
7510	2	0.032
9	1	0.000778
22	1	0.000966
23	1	0.00118
36	1	0.00181
79	1	0.0023
313	1	0.0143
1570	1	0.0157
5740	1	0.016
5990	1	0.016
6600	1	0.0163
7310	1	0.016
8980	1	0.0161
17900	1	0.0163
40000	1	0.0163
43400	1	0.0163

CL151 ----> CL3

No. of shared pairs: :13

CL151 ----> CL16

No. of shared pairs: :12

CL151 ----> CL24

No. of shared pairs: :11