Cluster no. 133
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Cluster is part of supercluster: 77
Cluster characteristics:
| size |
387 |
| size_real |
387 |
| ecount |
2720 |
| supercluster |
77 |
| annotations_summary |
|
| pair_completeness |
0.712389380530973 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00258397932816537 |
| satellite_probability |
1.39099901770407e-22 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
134 |
| S1 |
113 |
| S3 |
140 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
374 |
272 |
352 |
| S1 |
272 |
204 |
280 |
| S3 |
352 |
280 |
335 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
1.020 |
0.981 |
0.993 |
| S1 |
0.981 |
0.972 |
1.040 |
| S3 |
0.993 |
1.040 |
0.975 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 69 |
8 |
0.0262 |
| 2280 |
4 |
0.11 |
| 6670 |
4 |
0.116 |
| 1990 |
3 |
0.0857 |
| 4570 |
3 |
0.0857 |
| 61 |
2 |
0.0107 |
| 18000 |
2 |
0.0597 |
| 7 |
1 |
0.000459 |
| 14 |
1 |
0.00057 |
| 23 |
1 |
0.00122 |
| 37 |
1 |
0.000869 |
| 180 |
1 |
0.0183 |
| 555 |
1 |
0.0217 |
| 594 |
1 |
0.029 |
| 1060 |
1 |
0.0274 |
| 1890 |
1 |
0.0286 |
|