Cluster no. 132

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Cluster is part of supercluster: 76

Cluster characteristics:

size 403
size_real 403
ecount 1868
supercluster 76
annotations_summary 93.55% organelle/plastid
2.98% organelle/mitochondria
pair_completeness 0.840182648401826
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00248138957816377
satellite_probability 1.1655040537334e-23
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S2 137
S1 135
S3 131
comparative analysis - number of edges between species:
S2 S1 S3
S2 222 222 201
S1 222 235 194
S3 201 194 175
comparative analysis - observed/expected number of edges between species
S2 S1 S3
S2 0.995 0.988 1.020
S1 0.988 1.030 0.977
S3 1.020 0.977 1.000

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
mitochondria mitochondria 12 0.03
plastid plastid 377 0.94

clusters connected through mates:

Cluster Number of shared
read pairs		 k
499 8 0.327
431 6 0.261
94 3 0.0536
3970 2 0.1
4 1 0.000439
11 1 0.000799
39 1 0.00094
123 1 0.00763
237 1 0.0426
579 1 0.0476
29200 1 0.0541