Cluster no. 121
Go back to cluster table
Cluster is part of supercluster: 65
Cluster characteristics:
| size |
547 |
| size_real |
547 |
| ecount |
7627 |
| supercluster |
65 |
| annotations_summary |
|
| pair_completeness |
0.781758957654723 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.00182815356489945 |
| satellite_probability |
3.89552186042479e-23 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
comparative analysis:
Comparative analysis - species read counts:
| Species |
Read count |
| S2 |
171 |
| S1 |
174 |
| S3 |
202 |
comparative analysis - number of edges between species:
|
S2 |
S1 |
S3 |
| S2 |
768 |
768 |
898 |
| S1 |
768 |
751 |
888 |
| S3 |
898 |
888 |
1000 |
comparative analysis - observed/expected number of edges between species
|
S2 |
S1 |
S3 |
| S2 |
0.99 |
1.000 |
1.010 |
| S1 |
1.00 |
0.989 |
1.010 |
| S3 |
1.01 |
1.010 |
0.983 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
|
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 17 |
25 |
0.0199 |
| 49 |
23 |
0.038 |
| 9 |
1 |
0.000794 |
| 19 |
1 |
0.0029 |
| 24 |
1 |
0.000879 |
| 69 |
1 |
0.00327 |
| 109 |
1 |
0.0167 |
| 884 |
1 |
0.0244 |
| 1230 |
1 |
0.0263 |
| 1450 |
1 |
0.0263 |
| 5420 |
1 |
0.029 |
| 12600 |
1 |
0.0286 |
| 34000 |
1 |
0.029 |
|
CL121 ----> CL17
No. of shared pairs: :25
CL121 ----> CL49
No. of shared pairs: :23