Cluster no. 97

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Cluster is part of supercluster: 42

Cluster characteristics:

size 1304
size_real 1304
ecount 3116
supercluster 42
annotations_summary 0.08% organelle/mitochondria
pair_completeness 0.226716839134525
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000766871165644172
satellite_probability 1.51337771202e-20
consensus None
TAREAN_annotation Other
orientation_score 1

comparative analysis:


Comparative analysis - species read counts:
Species Read count
S2 399
S1 453
S3 452
comparative analysis - number of edges between species:
S2 S1 S3
S2 409 332 346
S1 332 337 328
S3 346 328 356
comparative analysis - observed/expected number of edges between species
S2 S1 S3
S2 1.080 0.955 0.963
S1 0.955 1.060 0.994
S3 0.963 0.994 1.040

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
mitochondria mitochondria 1 0.00077

clusters connected through mates:

Cluster Number of shared
read pairs
k
157 23 0.0467
131 20 0.0352
142 16 0.0302
612 5 0.0119
1520 4 0.00965
5320 4 0.00969
784 3 0.00715
2720 3 0.00724
7540 3 0.00726
4 2 0.000749
36 2 0.00221
679 2 0.00476
1030 2 0.00479
1560 2 0.00481
1580 2 0.00481
1850 2 0.00484
3510 2 0.00483
13500 2 0.00485
23200 2 0.00485
25000 2 0.00485
25700 2 0.00485
26800 2 0.00485
50300 2 0.00485
6 1 0.000543
12 1 0.000473
18 1 0.00044
19 1 0.00139
24 1 0.00066
27 1 0.000622
31 1 0.000619
42 1 0.000701
44 1 0.000813
68 1 0.000965
74 1 0.000732
80 1 0.000866
90 1 0.00123
139 1 0.00191
215 1 0.00233
307 1 0.00232
654 1 0.00237
702 1 0.00238
1070 1 0.0024
1260 1 0.00242
1440 1 0.00241
2100 1 0.00242
2180 1 0.00241
2410 1 0.00242
2660 1 0.00242
2990 1 0.00242
3140 1 0.00242
3430 1 0.00242
3460 1 0.00242
4480 1 0.00242
4630 1 0.00242
4780 1 0.00242
5980 1 0.00242
5980 1 0.00242
6350 1 0.00242
6890 1 0.00242
7130 1 0.00242
7150 1 0.00242
7300 1 0.00242
7460 1 0.00242
7600 1 0.00242
7940 1 0.00242
8540 1 0.00242
9030 1 0.00242
9760 1 0.00242
10600 1 0.00243
10600 1 0.00242
10900 1 0.00243
11100 1 0.00242
11600 1 0.00242
12400 1 0.00242
13100 1 0.00242
14700 1 0.00243
16000 1 0.00243
17300 1 0.00243
19700 1 0.00243
20400 1 0.00243
23500 1 0.00243
24900 1 0.00243
28200 1 0.00243
28600 1 0.00243
29800 1 0.00243
30600 1 0.00243
31600 1 0.00243
33900 1 0.00243
35500 1 0.00243
36500 1 0.00243
36900 1 0.00243
37400 1 0.00243
39200 1 0.00243
39800 1 0.00243
40100 1 0.00243
40100 1 0.00243
42000 1 0.00243
43700 1 0.00243
46700 1 0.00243
48200 1 0.00243
48300 1 0.00243
49700 1 0.00243
51800 1 0.00243

CL97 ----> CL157

image

No. of shared pairs: :23

CL97 ----> CL131

image

No. of shared pairs: :20

CL97 ----> CL142

image

No. of shared pairs: :16