Vlastní publikace

2013

• Palacky, J., Vorlickova, M., Kejnovska, I., Mojzes, P. (2013 ), Polymorphism of human telomeric quadruplex structure controlled by DNA concentration: a Raman study, NUCLEIC ACIDS RESEARCH 41, 1005-1016
• Kejnovsky, E., Michalovova, M., Steflova, P., Kejnovska, I., Manzano, S., Hobza, R., Kubat, Z., Kovarik, J., Jamilena, M., Vyskot, B. (2013 ), Expansion of Microsatellites on Evolutionary Young Y Chromosome, PLOS ONE 8
• Papezikova, I., Pekarova, M., Kolarova, H., Klinke, A., Lau, D., Baldus, S., Lojek, A., Kubala, L. (2013 ), Uric acid modulates vascular endothelial function through the down regulation of nitric oxide production, FREE RADICAL RESEARCH 47, 82-88
• Pracharova, J., Novakova, O., Kasparkova, J., Gibson, D., Brabec, V. (2013 ), Toxicity in tumor cells, DNA binding mode, and resistance to decomposition by sulfur nucleophiles of new dinuclear bifunctional trans-Pt-II complexes containing long alkane linkers, PURE AND APPLIED CHEMISTRY 85, 343-354

2012

• Raindlova, V., Pohl, R., Klepetarova, B., Havran, L., Simkova, E., Horakova, P., Pivonkova, H., Fojta, M., Hocek, M. (2012 ), Synthesis of Hydrazone-Modified Nucleotides and Their Polymerase Incorporation onto DNA for Redox Labeling, CHEMPLUSCHEM 77, 652-662
• Florian, J., Brabec, V. (2012 ), Thermodynamics of Translesion Synthesis across a Major DNA Adduct of Antitumor Oxaliplatin: Differential Scanning Calorimetric Study, CHEMISTRY-A EUROPEAN JOURNAL 18, 1634-1639
• Liboska, R., Ligasova, A., Strunin, D., Rosenberg, I., Koberna, K. (2012 ), Most Anti-BrdU Antibodies React with 2 '-Deoxy-5-Ethynyluridine - The Method for the Effective Suppression of This Cross-Reactivity, PLOS ONE 7
• Fojt, L., Doneux, T., Vetterl, V. (2012 ), Two-dimensional condensation of 5-fluorocytosine at the mercury electrode, ELECTROCHIMICA ACTA 73, 141-144
• Najdekrova, L., Siroky, J. (2012 ), NBS1 plays a synergistic role with telomerase in the maintenance of telomeres in Arabidopsis thaliana, BMC PLANT BIOLOGY 12
• Filipi, T., Mazura, P., Janda, L., Kiran, NS., Brzobohaty, B. (2012 ), Engineering the cytokinin-glucoside specificity of the maize beta-D-glucosidase Zm-p60.1 using site-directed random mutagenesis, PHYTOCHEMISTRY 74, 40-48
• Rajecky, M., Lojek, A., Ciz, M. (2012 ), Differentiating between intra- and extracellular chemiluminescence in diluted whole-blood samples, INTERNATIONAL JOURNAL OF LABORATORY HEMATOLOGY 34, 136-142
• Fojt, L., Vetterl, V. (2012 ), Electrochemical Evaluation of Extremely-Low Frequency Magnetic Field Effects on Sulphate-Reducing Bacteria, FOLIA BIOLOGICA 58, 44-48
• Palecek, E., Bartosik, M. (2012 ), Electrochemistry of Nucleic Acids, CHEMICAL REVIEWS
• Brabec, V., Malina, J., Margiotta, N., Natile, G., Kasparkova, J. (2012 ), Thermodynamic and Mechanistic Insights into Translesion DNA Synthesis Catalyzed by Y-Family DNA Polymerase Across a Bulky Double-Base Lesion of an Antitumor Platinum Drug, CHEMISTRY-A EUROPEAN JOURNAL 18, 15439-15448
• Foldynova-Trantirkova, S., Wilcox, WR., Krejci, P. (2012 ), Sixteen Years and Counting: The Current Understanding of Fibroblast Growth Factor Receptor 3 (FGFR3) Signaling in Skeletal Dysplasias, HUMAN MUTATION 33, 29-41
• Mladek, A., Sponer, JE., Kulhanek, P., Lu, XJ., Olson, WK., Sponer, J. (2012 ), Understanding the Sequence Preference of Recurrent RNA Building Blocks Using Quantum Chemistry: The Intrastrand RNA Dinucleotide Platform, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 8, 335-347
• Mlcouskova, J., Malina, J., Novohradsky, V., Kasparkova, J., Komeda, S., Brabec, V. (2012 ), Energetics, conformation, and recognition of DNA duplexes containing a major adduct of an anticancer azolato-bridged dinuclear Pt-II complex, BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS 1820, 1502-1511
• Brabec, V., Griffith, DM., Kisova, A., Kostrhunova, H., Zerzankova, L., Marmion, CJ., Kasparkova, J. (2012 ), Valuable Insight into the Anticancer Activity of the Platinum-Histone Deacetylase Inhibitor Conjugate, cis-[Pt(NH3)(2)malSAHA_(2H))], MOLECULAR PHARMACEUTICS 9, 1990-1999
• Fulneckova, J., Hasikova, T., Fajkus, J., Lukesova, A., Elias, M., Sykorova, E. (2012 ), Dynamic Evolution of Telomeric Sequences in the Green Algal Order Chlamydomonadales, GENOME BIOLOGY AND EVOLUTION 4, 248-264
• Ostatna, V., Cernocka, H., Kurzatkowska, K., Palecek, E. (2012 ), Native and denatured forms of proteins can be discriminated at edge plane carbon electrodes, ANALYTICA CHIMICA ACTA 735, 31-36
• Malina, J., Novakova, O., Natile, G., Brabec, V. (2012 ), The Thermodynamics of Translesion DNA Synthesis Past Major Adducts of Enantiomeric Analogues of Antitumor Cisplatin, CHEMISTRY-AN ASIAN JOURNAL 7, 1026-1031
• Palecek, E., Bartosik, M., Ostatna, V., Trefulka, M. (2012 ), Electrocatalysis in proteins, nucleic acids and carbohydrates, CHEMICAL RECORD 12, 27-45
• Ligasova, A., Strunin, D., Liboska, R., Rosenberg, I., Koberna, K. (2012 ), Atomic Scissors: A New Method of Tracking the 5-Bromo-2 '-Deoxyuridine-Labeled DNA In Situ, PLOS ONE 7
• Cegan, R., Vyskot, B., Kejnovsky, E., Kubat, Z., Blavet, H., Safar, J., Dolezel, J., Blavet, N., Hobza, R. (2012 ), Genomic Diversity in Two Related Plant Species with and without Sex Chromosomes - Silene latifolia and S. vulgaris, PLOS ONE 7
• Matyasek, R., Renny-Byfield, S., Fulnecek, J., Macas, J., Grandbastien, MA., Nichols, R., Leitch, A., Kovarik, A. (2012 ), Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number in Nicotiana diploids, BMC GENOMICS 13
• Starsichova, A., Hruba, E., Slabakova, E., Pernicova, Z., Prochazkova, J., Pencikova, K., Seda, V., Kabatkova, M., Vondracek, J., Kozubik, A., Machala, M., Soucek, K. (2012 ), TGF-beta 1 signaling plays a dominant role in the crosstalk between TGF-beta 1 and the aryl hydrocarbon receptor ligand in prostate epithelial cells, CELLULAR SIGNALLING 24, 1665-1676
• Sustackova, G., Kozubek, S., Stixova, L., Legartova, S., Matula, P., Orlova, D., Bartova, E. (2012 ), Acetylation-dependent nuclear arrangement and recruitment of BMI1 protein to UV-damaged chromatin, JOURNAL OF CELLULAR PHYSIOLOGY 227, 1838-1850
• Sustackova, G., Legartova, S., Kozubek, S., Stixova, L., Pachernik, J., Bartova, E. (2012 ), Differentiation-Independent Fluctuation of Pluripotency-Related Transcription Factors and Other Epigenetic Markers in Embryonic Stem Cell Colonies, STEM CELLS AND DEVELOPMENT 21, 710-720
• Polanska, E., Dobsakova, Z., Dvorackova, M., Fajkus, J., Stros, M. (2012 ), HMGB1 gene knockout in mouse embryonic fibroblasts results in reduced telomerase activity and telomere dysfunction, CHROMOSOMA 121, 419-431
• Bartosik, M., Fojta, M., Palecek, E. (2012 ), Electrochemical detection of 5-methylcytosine in bisulfite-treated DNA, ELECTROCHIMICA ACTA 78, 75-81
• Liskova, B., Zerzankova, L., Novakova, O., Kostrhunova, H., Travnicek, Z., Brabec, V. (2012 ), Cellular Response to Antitumor cis-Dichlorido Platinum(II) Complexes of CDK Inhibitor Bohemine and Its Analogues, CHEMICAL RESEARCH IN TOXICOLOGY 25, 500-509
• Pracharova, J., Zerzankova, L., Stepankova, J., Novakova, O., Farrer, NJ., Sadler, PJ., Brabec, V., Kasparkova, J. (2012 ), Interactions of DNA with a New Platinum(IV) Azide Dipyridine Complex Activated by UVA and Visible Light: Relationship to Toxicity in Tumor Cells, CHEMICAL RESEARCH IN TOXICOLOGY 25, 1099-1111
• Trefulka, M., Palecek, E. (2012 ), Voltammetric determination of Os(VI)-modified oligosaccharides at nanomolar level, BIOELECTROCHEMISTRY 88, 8-14
• Besseova, I., Banas, P., Kuhrova, P., Kosinova, P., Otyepka, M., Sponer, J. (2012 ), Simulations of A-RNA Duplexes. The Effect of Sequence, Solute Force Field, Water Model, and Salt Concentration, JOURNAL OF PHYSICAL CHEMISTRY B 116, 9899-9916
• Stixova, L., Matula, P., Kozubek, S., Gombitova, A., Cmarko, D., Raska, I., Bartova, E. (2012 ), Trajectories and nuclear arrangement of PML bodies are influenced by A-type lamin deficiency, BIOLOGY OF THE CELL 104, 418-432
• Garcia, S., Khaitova, LC., Kovarik, A. (2012 ), Expression of 5 S rRNA genes linked to 35 S rDNA in plants, their epigenetic modification and regulatory element divergence, BMC PLANT BIOLOGY 12
• Mlcouskova, J., Kasparkova, J., Suchankova, T., Komeda, S., Brabec, V. (2012 ), DNA conformation and repair of polymeric natural DNA damaged by antitumor azolato-bridged dinuclear Pt-II complex, JOURNAL OF INORGANIC BIOCHEMISTRY 114, 15-23
• Mlcouskova, J., Stepankova, J., Brabec, V. (2012 ), Antitumor carboplatin is more toxic in tumor cells when photoactivated: enhanced DNA binding, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 17, 891-898
• Florian, J., Kasparkova, J., Farrell, NP., Brabec, V. (2012 ), Thermodynamic stability and energetics of DNA duplexes containing major intrastrand cross-links of second-generation antitumor dinuclear Pt-II complexes, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 17, 187-196
• Sykorova, E., Fulneckova, J., Mokros, P., Fajkus, J., Fojtova, M., Peska, V. (2012 ), Three TERT genes in Nicotiana tabacum, CHROMOSOME RESEARCH 20, 381-394
• Orlova, DY., Stixova, L., Kozubek, S., Gierman, HJ., Sustackova, G., Chernyshev, AV., Medvedev, RN., Legartova, S., Versteeg, R., Matula, P., Stoklasa, R., Bartova, E. (2012 ), Arrangement of nuclear structures is not transmitted through mitosis but is identical in sister cells, JOURNAL OF CELLULAR BIOCHEMISTRY 113, 3313-3329
• Ciz, M., Denev, P., Kratchanova, M., Vasicek, O., Ambrozova, G., Lojek, A. (2012 ), Flavonoids Inhibit the Respiratory Burst of Neutrophils in Mammals, OXIDATIVE MEDICINE AND CELLULAR LONGEVITY
• Kovacova, V., Janousek, B. (2012 ), Bisprimer-A Program for the Design of Primers for Bisulfite-Based Genomic Sequencing of Both Plant and Mammalian DNA Samples, JOURNAL OF HEREDITY 103, 308-312
• Sponer, JE., Mladek, A., Sponer, J., Fuentes-Cabrera, M. (2012 ), Formamide-Based Prebiotic Synthesis of Nucleobases: A Kinetically Accessible Reaction Route, JOURNAL OF PHYSICAL CHEMISTRY A 116, 720-726
• Brazda, V., Coufal, J., Liao, JCC., Arrowsmith, CH. (2012 ), Preferential binding of IFI16 protein to cruciform structure and superhelical DNA, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 422, 716-720
• Vanhara, P., Hampl, A., Kozubik, A., Soucek, K. (2012 ), Growth/differentiation factor-15: prostate cancer suppressor or promoter?, PROSTATE CANCER AND PROSTATIC DISEASES 15, 320-328
• Hofer, M., Pospisil, M., Hoferova, Z., Weiterova, L., Komurkova, D. (2012 ), Stimulatory Action of Cyclooxygenase Inhibitors on Hematopoiesis: A Review, MOLECULES 17, 5615-5625
• Vorlickova, M., Kejnovska, I., Bednarova, K., Renciuk, D., Kypr, J. (2012 ), Circular Dichroism Spectroscopy of DNA: From Duplexes to Quadruplexes, CHIRALITY 24, 691-698
• Talianova, M., Zluvova, J., Hobza, R., Vyskot, B., Janousek, B. (2012 ), Identification and characterization of a bacteria-like sequence in the genome of some Silene species, BIOLOGIA PLANTARUM 56, 247-253
• Olivova, R., Stepankova, J., Muchova, T., Novohradsky, V., Novakova, O., Vrana, O., Kasparkova, J., Brabec, V. (2012 ), Mechanistic insights into toxic effects of a benzotriazolate-bridged dinuclear platinum(II) compound in tumor cells, INORGANICA CHIMICA ACTA 393, 204-211
• Foltankova, V., Legartova, S., Kozubek, S., Bartova, E. (2012 ), Tumor-specific histone signature and DNA methylation in multiple myeloma and leukemia cells, NEOPLASMA 59, 450-462
• Fojt, L., Klapetek, P., Strasak, L., Vetterl, V. (2012 ), Fibrinogen and cellular adherability on differently treated titanium as implants, CENTRAL EUROPEAN JOURNAL OF PHYSICS 10, 232-238
• Koci, L., Chlebova, K., Hyzdalova, M., Hofmanova, J., Jira, M., Kysela, P., Kozubik, A., Kala, Z., Krejci, P. (2012 ), Apoptosis inhibitor 5 (API-5; AAC-11; FIF) is upregulated in human carcinomas in vivo, ONCOLOGY LETTERS 3, 913-916

2011

• Palecek, E., Ostatna, V., Cernocka, H., Joerger, AC., Fersht, AR. (2011 ), Electrocatalytic Monitoring of Metal Binding and Mutation-Induced Conformational Changes in p53 at Picomole Level, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 133, 7190-7196
• Reshetnikov, RV., Sponer, J., Rassokhina, OI., Kopylov, AM., Tsvetkov, PO., Makarov, AA., Golovin, AV. (2011 ), Cation binding to 15-TBA quadruplex DNA is a multiple-pathway cation-dependent process, NUCLEIC ACIDS RESEARCH 39, 9789-9802
• Malina, J., Kasparkova, J., Farrell, NP., Brabec, V. (2011 ), Walking of antitumor bifunctional trinuclear Pt-II complex on double-helical DNA, NUCLEIC ACIDS RESEARCH 39, 720-728
• Pernicova, Z., Slabakova, E., Kharaishvili, G., Bouchal, J., Kral, M., Kunicka, Z., Machala, M., Kozubik, A., Soucek, K. (2011 ), Androgen Depletion Induces Senescence in Prostate Cancer Cells through Down-regulation of Skp2, NEOPLASIA 13, 526-536
• Macickova-Cahova, H., Pohl, R., Horakova, P., Havran, L., Spacek, J., Fojta, M., Hocek, M. (2011 ), Alkylsulfanylphenyl Derivatives of Cytosine and 7-Deazaadenine Nucleosides, Nucleotides and Nucleoside Triphosphates: Synthesis, Polymerase Incorporation to DNA and Electrochemical Study, CHEMISTRY-A EUROPEAN JOURNAL 17, 5833-5841
• Balintova, J., Pohl, R., Horakova, P., Vidlakova, P., Havran, L., Fojta, M., Hocek, M. (2011 ), Anthraquinone as a Redox Label for DNA: Synthesis, Enzymatic Incorporation, and Electrochemistry of Anthraquinone-Modified Nucleosides, Nucleotides, and DNA, CHEMISTRY-A EUROPEAN JOURNAL 17, 14063-14073
• Kisova, A., Zerzankova, L., Habtemariam, A., Sadler, PJ., Brabec, V., Kasparkova, J. (2011 ), Differences in the Cellular Response and Signaling Pathways between Cisplatin and Monodentate Organometallic Ru(II) Antitumor Complexes Containing a Terphenyl Ligand, MOLECULAR PHARMACEUTICS 8, 949-957
• Olivova, R., Kasparkova, J., Vrana, O., Vojtiskova, M., Suchankova, T., Novakova, O., He, WJ., Guo, ZJ., Brabec, V. (2011 ), Unique DNA Binding Mode of Antitumor Trinuclear Tridentate Platinum(II) Compound, MOLECULAR PHARMACEUTICS 8, 2368-2378
• Sponer, JE., Sponer, J., Fuentes-Cabrera, M. (2011 ), Prebiotic Routes to Nucleosides: A Quantum Chemical Insight into the Energetics of the Multistep Reaction Pathways, CHEMISTRY-A EUROPEAN JOURNAL 17, 847-854
• Kostrhunova, H., Malina, J., Pickard, AJ., Stepankova, J., Vojtiskova, M., Kasparkova, J., Muchova, T., Rohlfing, ML., Bierbach, U., Brabec, V. (2011 ), Replacement of a Thiourea with an Amidine Group in a Monofunctional Platinum-Acridine Antitumor Agent. Effect on DNA Interactions, DNA Adduct Recognition and Repair, MOLECULAR PHARMACEUTICS 8, 1941-1954
• Stepankova, J., Studenovsky, M., Malina, J., Kasparkova, J., Liskova, B., Novakova, O., Ulbrich, K., Brabec, V. (2011 ), DNA interactions of 2-pyrrolinodoxorubicin, a distinctively more potent daunosamine-modified analogue of doxorubicin, BIOCHEMICAL PHARMACOLOGY 82, 227-235
• Fojtova, M., Peska, V., Dobsakova, Z., Mozgova, I., Fajkus, J., Sykorova, E. (2011 ), Molecular analysis of T-DNA insertion mutants identified putative regulatory elements in the AtTERT gene, JOURNAL OF EXPERIMENTAL BOTANY 62, 5531-5545
• Blanarova, OV., Jelinkova, I., Szoor, A., Skender, B., Soucek, K., Horvath, V., Vaculova, A., Andera, L., Sova, P., Szollosi, J., Hofmanova, J., Vereb, G., Kozubik, A. (2011 ), Cisplatin and a potent platinum(IV) complex-mediated enhancement of TRAIL-induced cancer cells killing is associated with modulation of upstream events in the extrinsic apoptotic pathway, CARCINOGENESIS 32, 42-51
• Stixova, L., Bartova, E., Matula, P., Danek, O., Legartova, S., Kozubek, S. (2011 ), Heterogeneity in the kinetics of nuclear proteins and trajectories of substructures associated with heterochromatin, EPIGENETICS & CHROMATIN 4
• Khaitova, LC., Fojtova, M., Krizova, K., Lunerova, J., Fulnecek, J., Depicker, A., Kovarik, A. (2011 ), Paramutation of tobacco transgenes by small RNA-mediated transcriptional gene silencing, EPIGENETICS 6, 650-660
• Penttinen, N., Silvennoinen, M., Hason, S., Silvennoinen, R. (2011 ), Directional Sensing of Protein Adsorption on Titanium with a Light-Induced Periodic Structure, JOURNAL OF PHYSICAL CHEMISTRY C 115, 12951-12959
• Bartova, E., Sustackova, G., Stixova, L., Kozubek, S., Legartova, S., Foltankova, V. (2011 ), Recruitment of Oct4 Protein to UV-Damaged Chromatin in Embryonic Stem Cells, PLOS ONE 6
• Malina, J., Farrell, NP., Brabec, V. (2011 ), DNA Interstrand Cross-Links of an Antitumor Trinuclear Platinum(II) Complex: Thermodynamic Analysis and Chemical Probing, CHEMISTRY-AN ASIAN JOURNAL 6, 1566-1574
• Majerova, E., Fojtova, M., Mandakova, T., Fajkus, J. (2011 ), Methylation of plant telomeric DNA: what do the results say?, PLANT MOLECULAR BIOLOGY 77, 533-536
• Vondracek, J., Umannova, L., Machala, M. (2011 ), Interactions of the Aryl Hydrocarbon Receptor with Inflammatory Mediators: Beyond CYP1A Regulation, CURRENT DRUG METABOLISM 12, 89-103
• Bartova, E., Stixova, L., Galiova, G., Horakova, AH., Legartova, S., Kozubek, S. (2011 ), Mutant Genetic Background Affects the Functional Rearrangement and Kinetic Properties of JMJD2b Histone Demethylase, JOURNAL OF MOLECULAR BIOLOGY 405, 679-695
• Reblova, K., Sponer, JE., Spackova, N., Besseova, I., Sponer, J. (2011 ), A-Minor Tertiary Interactions in RNA Kink-Turns. Molecular Dynamics and Quantum Chemical Analysis, JOURNAL OF PHYSICAL CHEMISTRY B 115, 13897-13910
• Mlynsky, V., Banas, P., Walter, NG., Sponer, J., Otyepka, M. (2011 ), QM/MM Studies of Hairpin Ribozyme Self-Cleavage Suggest the Feasibility of Multiple Competing Reaction Mechanisms, JOURNAL OF PHYSICAL CHEMISTRY B 115, 13911-13924
• Viackova, D., Pekarova, M., Crhak, T., Bucsaiova, M., Matiasovic, J., Lojek, A., Kubala, L. (2011 ), Redox-sensitive regulation of macrophage-inducible nitric oxide synthase expression in vitro does not correlate with the failure of apocynin to prevent lung inflammation induced by endotoxin, IMMUNOBIOLOGY 216, 457-465
• Umannova, L., Machala, M., Topinka, J., Schmuczerova, J., Krcmar, P., Neca, J., Sujanova, K., Kozubik, A., Vondracek, J. (2011 ), Benzo[a]pyrene and tumor necrosis factor-alpha coordinately increase genotoxic damage and the production of proinflammatory mediators in alveolar epithelial type II cells, TOXICOLOGY LETTERS 206, 121-129
• Koci, L., Hyzd'alova, M., Vaculova, A., Hofmanova, J., Kozubik, A. (2011 ), Detachment-mediated resistance to TRAIL-induced apoptosis is associated with stimulation of the PI3K/Akt pathway in fetal and adenocarcinoma epithelial colon cells, CYTOKINE 55, 34-39
• Kostecka, P., Havran, L., Bittova, M., Pivonkova, H., Fojta, M. (2011 ), Sensing mispaired thymines in DNA heteroduplexes using an electroactive osmium marker: towards electrochemical SNP probing, ANALYTICAL AND BIOANALYTICAL CHEMISTRY 400, 197-204
• Palecek, E., Trefulka, M. (2011 ), Electrocatalytic detection of polysaccharides at picomolar concentrations, ANALYST 136, 321-326
• Prochazkova, J., Kozubik, A., Machala, M., Vondracek, J. (2011 ), Differential effects of indirubin and 2,3,7,8-tetrachlorodibenzo-p-dioxin on the aryl hydrocarbon receptor (AhR) signalling in liver progenitor cells, TOXICOLOGY 279, 146-154
• Brazda, V., Laister, RC., Jagelska, EB., Arrowsmith, C. (2011 ), Cruciform structures are a common DNA feature important for regulating biological processes, BMC MOLECULAR BIOLOGY 12
• Kaucka, M., Krejci, P., Plevova, K., Pavlova, S., Prochazkova, J., Janovska, P., Valnohova, J., Kozubik, A., Pospisilova, S., Bryja, V. (2011 ), Post-translational modifications regulate signalling by Ror1, ACTA PHYSIOLOGICA 203, 351-362
• Talianova, M., Janousek, B. (2011 ), WHAT CAN WE LEARN FROM TOBACCO AND OTHER SOLANACEAE ABOUT HORIZONTAL DNA TRANSFER?, AMERICAN JOURNAL OF BOTANY 98, 1231-1242
• Fojta, M., Havran, L., Pivonkova, H., Horakova, P., Hocek, M. (2011 ), Redox Labels and Indicators Based on Transition Metals and Organic Electroactive Moieties for Electrochemical Nucleic Acids Sensing, CURRENT ORGANIC CHEMISTRY 15, 2936-2949
• Malinska, H., Tate, JA., Mavrodiev, E., Matyasek, R., Lim, KY., Leitch, AR., Soltis, DE., Soltis, PS., Kovarik, A. (2011 ), Ribosomal RNA genes evolution in Tragopogon: A story of New and Old World allotetraploids and the synthetic lines, TAXON 60, 348-354
• Zgarbova, M., Jurecka, P., Banas, P., Otyepka, M., Sponer, JE., Leontis, NB., Zirbel, CL., Sponer, J. (2011 ), Noncanonical Hydrogen Bonding in Nucleic Acids. Benchmark Evaluation of Key Base-Phosphate Interactions in Folded RNA Molecules Using Quantum-Chemical Calculations and Molecular Dynamics Simulations, JOURNAL OF PHYSICAL CHEMISTRY A 115, 11277-11292
• Bartosik, M., Palecek, E. (2011 ), Square Wave Stripping Voltammetry of Unlabeled Single- and Double-Stranded DNAs, ELECTROANALYSIS 23, 1311-1319
• Renciuk, D., Kypr, J., Vorlickova, M. (2011 ), CGG Repeats Associated with Fragile X Chromosome Form Left-Handed Z-DNA Structure, BIOPOLYMERS 95, 174-181
• Fulnecek, J., Matyasek, R., Votruba, I., Holy, A., Krizova, K., Kovarik, A. (2011 ), Inhibition of SAH-hydrolase activity during seed germination leads to deregulation of flowering genes and altered flower morphology in tobacco, MOLECULAR GENETICS AND GENOMICS 285, 225-236
• Hofer, M., Pospisil, M., Dusek, L., Hoferova, Z., Weiterova, L. (2011 ), A Single Dose of an Inhibitor of Cyclooxygenase 2, Meloxicam, Administered Shortly after Irradiation Increases Survival of Lethally Irradiated Mice, RADIATION RESEARCH 176, 269-272
• Rezacova, M., Rudolfova, G., Tichy, A., Bacikova, A., Mutna, D., Havelek, R., Vavrova, J., Odrazka, K., Lukasova, E., Kozubek, S. (2011 ), Accumulation of DNA Damage and Cell Death after Fractionated Irradiation, RADIATION RESEARCH 175, 708-718
• Hofer, M., Pospisil, M. (2011 ), Modulation of Animal and Human Hematopoiesis by beta-Glucans: A Review, MOLECULES 16, 7969-7979
• Fojta, M., Kostecka, P., Pivonkova, H., Horakova, P., Havran, L. (2011 ), Osmium Tetroxide Complexes as Versatile Tools for Structure Probing and Electrochemical Analysis of Biopolymers, CURRENT ANALYTICAL CHEMISTRY 7, 35-50
• Ambrozova, G., Pekarova, M., Lojek, A. (2011 ), The effect of lipid peroxidation products on reactive oxygen species formation and nitric oxide production in lipopolysaccharide-stimulated RAW 264.7 macrophages, TOXICOLOGY IN VITRO 25, 145-152
• Hasova, M., Crhak, T., Safrankova, B., Dvorakova, J., Muthny, T., Velebny, V., Kubala, L. (2011 ), Hyaluronan minimizes effects of UV irradiation on human keratinocytes, ARCHIVES OF DERMATOLOGICAL RESEARCH 303, 277-284
• Jugova, A., Sustackova, G., Legartova, S., Stixova, L., Kozubek, S., Bartova, E. (2011 ), Effects of epigenetic-based anti-cancer drugs in leukaemia and multiple myeloma cells, CELL BIOLOGY INTERNATIONAL 35, 1195-1203
• Hofer, M., Pospisil, M., Weiterova, L., Hoferova, Z. (2011 ), The Role of Adenosine Receptor Agonists in Regulation of Hematopoiesis, MOLECULES 16, 675-685
• Talianova, M., Vyskot, B., Janousek, B. (2011 ), Interkingdom protein domain fusion: the case of an antimicrobial protein in potato (Solanum tuberosum), PLANT SYSTEMATICS AND EVOLUTION 297, 129-139
• Hofer, M., Dusek, L., Hoferova, Z., Stixova, L., Pospisil, M. (2011 ), Expression of mRNA for Adenosine A(1), A(2a), A(2b), and A(3) Receptors in HL-60 Cells: Dependence on Cell Cycle Phases, PHYSIOLOGICAL RESEARCH 60, 913-920
• Hofer, M., Pospisil, M., Dusek, L., Hoferova, Z., Weiterova, L. (2011 ), Inhibition of cyclooxygenase-2 promotes the stimulatory action of adenosine A(3) receptor agonist on hematopoiesis in sublethally gamma-irradiated mice, BIOMEDICINE & PHARMACOTHERAPY 65, 427-431
• Mladek, A., Sponer, J., Sumpter, BG., Fuentes-Cabrera, M., Sponer, JE. (2011 ), On the Geometry and Electronic Structure of the As-DNA Backbone, JOURNAL OF PHYSICAL CHEMISTRY LETTERS 2, 389-392
• Slabakova, E., Pernicova, Z., Slavickova, E., Starsichova, A., Kozubik, A., Soucek, K. (2011 ), TGF-beta 1-Induced EMT of Non-Transformed Prostate Hyperplasia Cells Is Characterized by Early Induction of SNAI2/Slug, PROSTATE 71, 1332-1343

2010

• Spackova, N., Reblova, K., Sponer, J. (2010 ), Structural Dynamics of the Box C/D RNA Kink-Turn and Its Complex with Proteins: The Role of the A-Minor 0 Interaction, Long-Residency Water Bridges, and Structural Ion-Binding Sites Revealed by Molecular Simulations, JOURNAL OF PHYSICAL CHEMISTRY B 114, 10581-10593
• Ambrozova, G., Pekarova, M., Lojek, A. (2010 ), Effect of polyunsaturated fatty acids on the reactive oxygen and nitrogen species production by raw 264.7 macrophages, EUROPEAN JOURNAL OF NUTRITION 49, 133-139
• Kejnovsky, E., Vyskot, B. (2010 ), Silene latifolia: The Classical Model to Study Heteromorphic Sex Chromosomes, CYTOGENETIC AND GENOME RESEARCH 129, 250-262
• Streitova, D., Hofer, M., Hola, J., Vacek, A., Pospisil, M. (2010 ), Adenosine A(1), A(2a), A(2b), and A(3) Receptors in Hematopoiesis. 2. Expression of Receptor mRNA in Resting and Lipopolysaccharide-Activated Mouse RAW 264.7 Macrophages, PHYSIOLOGICAL RESEARCH 59, 139-144
• Kostrhunova, H., Kasparkova, J., Gibson, D., Brabec, V. (2010 ), Studies on Cellular Accumulation of Satraplatin and Its Major Metabolite JM118 and Their Interactions with Glutathione, MOLECULAR PHARMACEUTICS 7, 2093-2102
• Reblova, K., Strelcova, Z., Kulhanek, P., Besseova, I., Mathews, DH., Van Nostrand, K., Yildirim, I., Turner, DH., Sponer, J. (2010 ), An RNA Molecular Switch: Intrinsic Flexibility of 23S rRNA Helices 40 and 68 5 '-UAA/5 '-GAN Internal Loops Studied by Molecular Dynamics Methods, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 6, 910-929
• Mladek, A., Sponer, JE., Jurecka, P., Banas, P., Otyepka, M., Svozil, D., Sponer, J. (2010 ), Conformational Energies of DNA Sugar-Phosphate Backbone: Reference QM Calculations and a Comparison with Density Functional Theory and Molecular Mechanics, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 6, 3817-3835
• Malinska, H., Tate, JA., Matyasek, R., Leitch, AR., Soltis, DE., Soltis, PS., Kovarik, A. (2010 ), Similar patterns of rDNA evolution in synthetic and recently formed natural populations of Tragopogon (Asteraceae) allotetraploids, BMC EVOLUTIONARY BIOLOGY 10
• Soucek, K., Slabakova, E., Ovesna, P., Malenovska, A., Kozubik, A., Hampl, A. (2010 ), Growth/differentiation factor-15 is an abundant cytokine in human seminal plasma, HUMAN REPRODUCTION 25, 2962-2971
• Zluvova, J., Zak, J., Janousek, B., Vyskot, B. (2010 ), Dioecious Silene latifolia plants show sexual dimorphism in the vegetative stage, BMC PLANT BIOLOGY 10, 208
• Kostrhunova, H., Vrana, O., Suchankova, T., Gibson, D., Kasparkova, J., Brabec, V. (2010 ), Different Features of the DNA Binding Mode of Antitumor cis-Amminedichlorido(cyclohexylamine)platinum(H) (JM118) and Cisplatin in Vitro, CHEMICAL RESEARCH IN TOXICOLOGY 23, 1833-1842
• Sponer, J., Sponer, JE., Petrov, AI., Leontis, NB. (2010 ), Quantum Chemical Studies of Nucleic Acids Can We Construct a Bridge to the RNA Structural Biology and Bioinformatics Communities?, JOURNAL OF PHYSICAL CHEMISTRY B 114, 15723-15741
• Heyrovska, R. (2010 ), Radii of Redox Components from Absolute Redox Potentials Compared with Covalent and Aqueous Ionic Radii, ELECTROANALYSIS 22, 903-907
• Kolarova, H., Bino, L., Pejchalova, K., Kubala, L. (2010 ), The Expression of NADPH Oxidases and Production of Reactive Oxygen Species by Human Lung Adenocarcinoma Epithelial Cell Line A549, FOLIA BIOLOGICA 56, 211-217
• Ditzler, MA., Otyepka, M., Sponer, J., Walter, NG. (2010 ), Molecular Dynamics and Quantum Mechanics of RNA: Conformational and Chemical Change We Can Believe In, ACCOUNTS OF CHEMICAL RESEARCH 43, 40-47
• Ostatna, V., Cernocka, H., Palecek, E. (2010 ), Protein Structure-Sensitive Electrocatalysis at Dithiothreitol-Modified Electrodes, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 132, 9408-9413
• Besseova, I., Reblova, K., Leontis, NB., Sponer, J. (2010 ), Molecular dynamics simulations suggest that RNA three-way junctions can act as flexible RNA structural elements in the ribosome, NUCLEIC ACIDS RESEARCH 38, 6247-6264
• Dvorackova, M., Rossignol, P., Shaw, PJ., Koroleva, OA., Doonan, JH., Fajkus, J. (2010 ), AtTRB1, a telomeric DNA-binding protein from Arabidopsis, is concentrated in the nucleolus and shows highly dynamic association with chromatin, PLANT JOURNAL 61, 637-649
• Kubala, L., Schmelzer, KR., Klinke, A., Kolarova, H., Baldus, S., Hammock, BD., Eiserich, JP. (2010 ), Modulation of arachidonic and linoleic acid metabolites in myeloperoxidase-deficient mice during acute inflammation, FREE RADICAL BIOLOGY AND MEDICINE 48, 1311-1320
• Koukalova, B., Moraes, AP., Renny-Byfield, S., Matyasek, R., Leitch, AR., Kovarik, A. (2010 ), Fall and rise of satellite repeats in allopolyploids of Nicotiana over c. 5 million years, NEW PHYTOLOGIST 186, 148-160
• Novakova, O., Malina, J., Suchankova, T., Kasparkova, J., Bugarcic, T., Sadler, PJ., Brabec, V. (2010 ), Energetics, Conformation, and Recognition of DNA Duplexes Modified by Monodentate Ru-II Complexes Containing Terphenyl Arenes, CHEMISTRY-A EUROPEAN JOURNAL 16, 5744-5754
• Sponer, JE., Vazquez-Mayagoitia, A., Sumpter, BG., Leszczynski, J., Sponer, J., Otyepka, M., Banas, P., Fuentes-Cabrera, M. (2010 ), Theoretical Studies on the Intermolecular Interactions of Potentially Primordial Base-Pair Analogues, CHEMISTRY-A EUROPEAN JOURNAL 16, 3057-3065
• Horakova, P., Tesnohlidkova, L., Havran, L., Vidlakova, P., Pivonkova, H., Fojta, M. (2010 ), Determination of the Level of DNA Modification with Cisplatin by Catalytic Hydrogen Evolution at Mercury-Based Electrodes, ANALYTICAL CHEMISTRY 82, 2969-2976
• Pivonkova, H., Horakova, P., Fojtova, M., Fojta, M. (2010 ), Direct Voltammetric Analysis of DNA Modified with Enzymatically Incorporated 7-Deazapurines, ANALYTICAL CHEMISTRY 82, 6807-6813
• Juskova, P., Ostatna, V., Palecek, E., Foret, F. (2010 ), Fabrication and Characterization of Solid Mercury Amalgam Electrodes for Protein Analysis, ANALYTICAL CHEMISTRY 82, 2690-2695
• Horakova, AH., Bartova, E., Galiova, G., Uhlirova, R., Matula, P., Kozubek, S. (2010 ), SUV39h-independent association of HP1 beta with fibrillarin-positive nucleolar regions, CHROMOSOMA 119, 227-241
• Zerzankova, L., Suchankova, T., Vrana, O., Farrell, NP., Brabec, V., Kasparkova, J. (2010 ), Conformation and recognition of DNA modified by a new antitumor dinuclear Pt-II complex resistant to decomposition by sulfur nucleophiles, BIOCHEMICAL PHARMACOLOGY 79, 112-121
• Kasparkova, J., Suchankova, T., Halamikova, A., Zerzankova, L., Vrana, O., Margiotta, N., Natile, G., Brabec, V. (2010 ), Cytotoxicity, cellular uptake, glutathione and DNA interactions of an antitumor large-ring Pt-II chelate complex incorporating the cis-1,4-diaminocyclohexane carrier ligand, BIOCHEMICAL PHARMACOLOGY 79, 552-564
• Zerzankova, L., Kostrhunova, H., Vojtiskova, M., Novakova, O., Suchankova, T., Lin, MX., Guo, ZJ., Kasparkova, J., Brabec, V. (2010 ), Mechanistic insights into antitumor effects of new dinuclear cis Pt-II complexes containing aromatic linkers, BIOCHEMICAL PHARMACOLOGY 80, 344-351
• Trefulka, M., Bartosik, M., Palecek, E. (2010 ), Facile end-labeling of RNA with electroactive Os(VI) complexes, ELECTROCHEMISTRY COMMUNICATIONS 12, 1760-1763
• Khaitova, L., Werlemark, G., Nybom, H., Kovarik, A. (2010 ), Frequent silencing of rDNA loci on the univalent-forming genomes contrasts with their stable expression on the bivalent-forming genomes in polyploid dogroses (Rosa sect. Caninae), HEREDITY 104, 113-120
• Morgado, CA., Jurecka, P., Svozil, D., Hobza, P., Sponer, J. (2010 ), Reference MP2/CBS and CCSD(T) quantum-chemical calculations on stacked adenine dimers. Comparison with DFT-D, MP2.5, SCS(MI)-MP2, M06-2X, CBS(SCS-D) and force field descriptions, PHYSICAL CHEMISTRY CHEMICAL PHYSICS 12, 3522-3534
• Starsichova, A., Lincova, E., Pernicova, Z., Kozubik, A., Soucek, K. (2010 ), TGF-beta 1 suppresses IL-6-induced STAT3 activation through regulation of Jak2 expression in prostate epithelial cells, CELLULAR SIGNALLING 22, 1734-1744
• Doneux, T., Dorcak, V., Palecek, E. (2010 ), Influence of the Interfacial Peptide Organization on the Catalysis of Hydrogen Evolution, LANGMUIR 26, 1347-1353
• Garcia, S., Panero, J.L., Siroky, J., Kovarik, A. (2010 ), Repeated reunions and splits feature the highly dynamic evolution of 5S and 35S ribosomal RNA genes (rDNA) in the Asteraceae family, BMC PLANT BIOLOGY 10: e176.
• Cegan, R., Marais, G.A.B., Kubekova, H., Blavet, N., Widmer, A., Vyskot, B., Dolezel, J., Safar, J., Hobza, R. (2010 ), Structure and evolution of Apetala3, a sex-linked gene in Silene latifolia, BMC PLANT BIOLOGY 10: e180.
• Nemcova, K., Havran, L., Sebest, P., Brazdova, M., Pivonkova, H., Fojta, M. (2010 ), A label-free electrochemical test for DNA-binding activities of tumor suppressor protein p53 using immunoprecipitation at magnetic beads, ANALYTICA CHIMICA ACTA 668, 166-170
• Horakova, AH., Galiova, G., Legartova, S., Kozubek, S., Matula, P., Bartova, E. (2010 ), Chromocentre integrity and epigenetic marks, JOURNAL OF STRUCTURAL BIOLOGY 169, 124-133
• Stros, M. (2010 ), HMGB proteins: Interactions with DNA and chromatin, BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 1799, 101-113
• Bartova, E., Galiova, G., Legartova, S., Stixova, L., Jugova, A., Kozubek, S. (2010 ), Genome Instability in the Context of Chromatin Structure and Fragile Sites, CRITICAL REVIEWS IN EUKARYOTIC GENE EXPRESSION 20, 181-194
• Uhlirova, R., Horakova, AH., Galiova, G., Legartova, S., Matula, P., Fojtova, M., Varecha, M., Amrichova, J., Vondracek, J., Kozubek, S., Bartova, E. (2010 ), SUV39h-and A-Type Lamin-Dependent Telomere Nuclear Rearrangement, JOURNAL OF CELLULAR BIOCHEMISTRY 109, 915-926
• Hofer, M., Pospisil, M., Dusek, L., Hola, J., Hoferova, Z., Weiterova, L. (2010 ), Basal and induced granulopoiesis in outbred, F-1 hybrid and inbred mice: can inbreeding depression influence the experimental practice?, EXPERIMENTAL BIOLOGY AND MEDICINE 235, 928-931
• Aladag, N., Trnkova, L., Kourilova, A., Ozsoz, M., Jelen, F. (2010 ), Voltammetric Study of Aminopurines on Pencil Graphite Electrode in the Presence of Copper Ions, ELECTROANALYSIS 22, 1675-1681
• Trefulka, M., Palecek, E. (2010 ), Voltammetry of Os(VI)-Modified Polysaccharides, ELECTROANALYSIS 22, 1837-1845
• Sagi, J., Renciuk, D., Tomasko, M., Vorlickova, M. (2010 ), Quadruplexes of Human Telomere DNA Analogs Designed to Contain G:A:G:A, G:G:A:A, and A:A:A:A Tetrads, BIOPOLYMERS 93, 880-886
• Horakova, AH., Bartova, E., Kozubek, S. (2010 ), Chromatin Structure with Respect to Histone Signature Changes during Cell Differentiation, CELL STRUCTURE AND FUNCTION 35, 31-44
• Pracharova, L., Okenkova, K., Lojek, A., Ciz, M. (2010 ), Serotonin and its 5-HT2 receptor agonist DOI hydrochloride inhibit the oxidative burst in total leukocytes but not in isolated neutrophils, LIFE SCIENCES 86, 518-523
• Pivonkova, H., Sebest, P., Pecinka, P., Ticha, O., Nemcova, K., Brazdova, M., Jagelska, EB., Brazda, V., Fojta, M. (2010 ), Selective binding of tumor suppressor p53 protein to topologically constrained DNA: Modulation by intercalative drugs, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 393, 894-899
• Jagelska, EB., Pivonkova, H., Fojta, M., Brazda, V. (2010 ), The potential of the cruciform structure formation as an important factor influencing p53 sequence-specific binding to natural DNA targets, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 391, 1409-1414
• Ciz, M., Cizova, H., Denev, P., Kratchanova, M., Slavov, A., Lojek, A. (2010 ), Different methods for control and comparison of the antioxidant properties of vegetables, FOOD CONTROL 21, 518-523
• Bartova, E., Horakova, AH., Uhlirova, R., Raska, I., Galiova, G., Orlova, D., Kozubek, S. (2010 ), Structure and Epigenetics of Nucleoli in Comparison With Non-nucleolar Compartments, JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY 58, 391-403
• Janousek, B., Mrackova, M. (2010 ), Sex chromosomes and sex determination pathway dynamics in plant and animal models, BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY 100, 737-752
• Safrankova, B., Gajdova, S., Kubala, L. (2010 ), The Potency of Hyaluronan of Different Molecular Weights in the Stimulation of Blood Phagocytes, MEDIATORS OF INFLAMMATION
• Hofer, M., Pospisil, M., Sefc, L., Dusek, L., Vacek, A., Hola, J., Hoferova, Z., Streitova, D. (2010 ), Activation of adenosine A(3) receptors supports hematopoiesis-stimulating effects of granulocyte colony-stimulating factor in sublethally irradiated mice, INTERNATIONAL JOURNAL OF RADIATION BIOLOGY 86, 649-656
• Michu, E., Mrackova, M., Vyskot, B., Zluvova, J. (2010 ), Reduction of heteroduplex formation in PCR amplification, BIOLOGIA PLANTARUM 54, 173-176
• Soucek, K., Gajduskova, P., Brazdova, M., Hyzd'alova, M., Koci, L., Vydra, D., Trojanec, R., Pernicova, Z., Lentvorska, L., Hajduch, M., Hofmanova, J., Kozubik, A. (2010 ), Fetal colon cell line FHC exhibits tumorigenic phenotype, complex karyotype, and TP53 gene mutation, CANCER GENETICS AND CYTOGENETICS 197, 107-116
• Streitova, D., Sefc, L., Savvulidi, F., Pospisil, M., Hola, J., Hofer, M. (2010 ), Adenosine A(1), A(2a), A(2b), and A(3) Receptors in Hematopoiesis. 1. Expression of Receptor mRNA in Four Mouse Hematopoietic Precursor Cells, PHYSIOLOGICAL RESEARCH 59, 133-137
• Svihalkova-Sindlerova, L., Foltinova, V., Vaculova, A., Horvath, V., Soucek, K., Sova, P., Hofmanova, J., Kozubik, A. (2010 ), LA-12 Overcomes Confluence-dependent Resistance of HT-29 Colon Cancer Cells to Pt (II) Compounds, ANTICANCER RESEARCH 30, 1183-1188
• Legartova, S., Harnicarova-Horakova, A., Bartova, E., Hajek, R., Pour, L., Kozubek, S. (2010 ), Expression of RAN, ZHX-2, and CHC1L genes in multiple myeloma patients and in myeloma cell lines treated with HDAC and Dnmts inhibitors, NEOPLASMA 57, 482-487
• Konopka, R., Hyzdalova, M., Kubala, L., Pachernik, J. (2010 ), New Luminescence-Based Approach to Measurement of Luciferase Gene Expression Reporter Activity and Adenosine Triphosphate-Based Determination of Cell Viability, FOLIA BIOLOGICA 56, 66-71
• Fojt, L., Strasak, L., Vetterl, V. (2010 ), Extremely-Low Frequency Magnetic Field Effects on Sulfate Reducing Bacteria Viability, ELECTROMAGNETIC BIOLOGY AND MEDICINE 29, 177-185

2009

• Stros, M., Polanska, E., Struncova, S., Pospilova, S. (2009 ), HMGB1 and HMGB2 proteins up-regulate cellular expression of human topoisomerase II alpha, NUCLEIC ACIDS RESEARCH 37, 2070-2086
• Malina, J., Vrana, O., Brabec, V. (2009 ), Mechanistic studies of the modulation of cleavage activity of topoisomerase I by DNA adducts of mono- and bi-functional Pt-II complexes, NUCLEIC ACIDS RESEARCH 37, 5432-5442
• Krizova, K., Fojtova, M., Depicker, A., Kovarik, A. (2009 ), Cell Culture-Induced Gradual and Frequent Epigenetic Reprogramming of Invertedly Repeated Tobacco Transgene Epialleles, PLANT PHYSIOLOGY 149, 1493-1504
• Palecek, E., Ostatna, V. (2009 ), Ionic strength-dependent structural transition of proteins at electrode surfaces, CHEMICAL COMMUNICATIONS, 1685-1687
• Novakova, O., Malina, J., Kasparkova, J., Halamikova, A., Bernard, V., Intini, F., Natile, G., Brabec, V. (2009 ), Energetics, Conformation, and Recognition of DNA Duplexes Modified by Methylated Analogues of [PtCl(dien)](+), CHEMISTRY-A EUROPEAN JOURNAL 15, 6211-6221
• Ruhayel, RA., Moniodis, JJ., Yang, XH., Kasparkova, J., Brabec, V., Berners-Price, SJ., Farrell, NP. (2009 ), Factors Affecting DNA-DNA Interstrand Cross-Links in the Antiparallel 3 '-3 ' Sense: A Comparison with the 5 '-5 ' Directional Isomer, CHEMISTRY-A EUROPEAN JOURNAL 15, 9365-9374
• Jelen, F., Olejniczak, AB., Kourilova, A., Lesnikowski, ZJ., Palecek, E. (2009 ), Electrochemical DNA Detection Based on the Polyhedral Boron Cluster Label, ANALYTICAL CHEMISTRY 81, 840-844
• Hason, S., Stepankova, S., Kourilova, A., Vetterl, V., Lata, J., Fojta, M., Jelen, F. (2009 ), Simultaneous Electrochemical Monitoring of Metabolites Related to the Xanthine Oxidase Pathway Using a Grinded Carbon Electrode, ANALYTICAL CHEMISTRY 81, 4302-4307
• Garcia, S., Lim, KY., Chester, M., Garnatje, T., Pellicer, J., Valles, J., Leitch, AR., Kovarik, A. (2009 ), Linkage of 35S and 5S rRNA genes in Artemisia (family Asteraceae): first evidence from angiosperms, CHROMOSOMA 118, 85-97
• Hofmanova, J., Vaculova, A., Koubkova, Z., Hyzd'alova, M., Kozubik, A. (2009 ), Human fetal colon cells and colon cancer cells respond differently to butyrate and PUFAs, MOLECULAR NUTRITION & FOOD RESEARCH 53, S102-S113
• Lincova, E., Hampl, A., Pernicova, Z., Starsichova, A., Krcmar, P., Machala, M., Kozubik, A., Soucek, K. (2009 ), Multiple defects in negative regulation of the PKB/Akt pathway sensitise human cancer cells to the antiproliferative effect of non-steroidal anti-inflammatory drugs, BIOCHEMICAL PHARMACOLOGY 78, 561-572
• Strmecki, S., Plavsic, M., Cosovic, B., Ostatna, V., Palecek, E. (2009 ), Constant current chronopotentiometric stripping of sulphated polysaccharides, ELECTROCHEMISTRY COMMUNICATIONS 11, 2032-2035
• Kejnovsky, E., Hobza, R., Cermak, T., Kubat, Z., Vyskot, B. (2009 ), The role of repetitive DNA in structure and evolution of sex chromosomes in plants, HEREDITY 102, 533-541
• Besseova, I., Otyepka, M., Reblova, K., Sponer, J. (2009 ), Dependence of A-RNA simulations on the choice of the force field and salt strength, PHYSICAL CHEMISTRY CHEMICAL PHYSICS 11, 10701-10711
• Klejdus, B., Kopecky, J., Benesova, L., Vacek, J. (2009 ), Solid-phase/supercritical-fluid extraction for liquid chromatography of phenolic compounds in freshwater microalgae and selected cyanobacterial species, JOURNAL OF CHROMATOGRAPHY A 1216, 763-771
• Sykorova, E., Fajkus, J. (2009 ), Structure-function relationships in telomerase genes, BIOLOGY OF THE CELL 101, 375-392
• Doneux, T., De Decker, Y. (2009 ), A Simple Model to Describe the Effect of Electrostatic Interactions on the Composition of Mixed Self-Assembled Monolayers, LANGMUIR 25, 2199-2203
• Vaculova, A., Hofmanova, J., Zatloukalova, J., Kozubik, A. (2009 ), Differences in TRAIL-induced changes of Mcl-1 expression among distinct human colon epithelial cell lines, EXPERIMENTAL CELL RESEARCH 315, 3259-3266
• Mladek, A., Sharma, P., Mitra, A., Bhattacharyya, D., Sponer, J., Sponer, JE. (2009 ), Trans Hoogsteen/Sugar Edge Base Pairing in RNA. Structures, Energies, and Stabilities from Quantum Chemical Calculations, JOURNAL OF PHYSICAL CHEMISTRY B 113, 1743-1755
• Doneux, T., Fojt, L. (2009 ), Interaction of Cytidine 5 '-Monophosphate with Au(111): An In Situ Infrared Spectroscopic Study, CHEMPHYSCHEM 10, 1649-1655
• Heringova, P., Kasparkova, J., Brabec, V. (2009 ), DNA adducts of antitumor cisplatin preclude telomeric sequences from forming G quadruplexes, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 14, 959-968
• Suchankova, T., Vojtiskova, M., Reedijk, J., Brabec, V., Kasparkova, J. (2009 ), DNA and glutathione interactions in cell-free media of asymmetric platinum(II) complexes cis- and trans-[PtCl2(isopropylamine)(1-methylimidazole)]: relations to their different antitumor effects, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 14, 75-87
• Hason, S., Vetterl, V., Jelen, F., Fojta, M. (2009 ), Improved sensitivity and selectivity of uric acid voltammetric sensing with mechanically grinded carbon/graphite electrodes, ELECTROCHIMICA ACTA 54, 1864-1873
• Vanhara, P., Lincova, E., Kozubik, A., Jurdic, P., Soucek, K., Smarda, J. (2009 ), Growth/differentiation factor-15 inhibits differentiation into osteoclasts-A novel factor involved in control of osteoclast differentiation, DIFFERENTIATION 78, 213-222
• Palecek, E., Ostatna, V. (2009 ), Potential-dependent surface denaturation of BSA in acid media, ANALYST 134, 2076-2080
• Riedl, J., Horakova, P., Sebest, P., Pohl, R., Havran, L., Fojta, M., Hocek, M. (2009 ), Tetrathiafulvalene-Labelled Nucleosides and Nucleoside Triphosphates: Synthesis, Electrochemistry and the Scope of Their Polymerase Incorporation into DNA, EUROPEAN JOURNAL OF ORGANIC CHEMISTRY, 3519-3525
• Fojt, L., Vetterl, V., Doneux, T. (2009 ), Adsorption and two-dimensional condensation of 5-methylcytosine, BIOELECTROCHEMISTRY 75, 89-94
• Bartosik, M., Ostatna, V., Palecek, E. (2009 ), Electrochemistry of riboflavin-binding protein and its interaction with riboflavin, BIOELECTROCHEMISTRY 76, 70-75
• Horakova, P., Simkova, E., Vychodilova, Z., Brazdova, M., Fojta, M. (2009 ), Detection of Single Nucleotide Polymorphisms in p53 Mutation Hotspots and Expression of Mutant p53 in Human Cell Lines Using an Enzyme-Linked Electrochemical Assay, ELECTROANALYSIS 21, 1723-1729
• Vacek, J., Havran, L., Fojta, M. (2009 ), Ex situ Voltammetry and Chronopotentiometry of Doxorubicin at a Pyrolytic Graphite Electrode: Redox and Catalytic Properties and Analytical Applications, ELECTROANALYSIS 21, 2139-2144
• Fulnecek, J., Matyasek, R., Kovarik, A. (2009 ), Faithful inheritance of cytosine methylation patterns in repeated sequences of the allotetraploid tobacco correlates with the expression of DNA methyltransferase gene families from both parental genomes, MOLECULAR GENETICS AND GENOMICS 281, 407-420
• Prochazkova, J., Stixova, L., Soucek, K., Hofmanova, J., Kozubik, A. (2009 ), Monocytic differentiation of leukemic HL-60 cells induced by co-treatment with TNF-alpha and MK886 requires activation of pro-apoptotic machinery, EUROPEAN JOURNAL OF HAEMATOLOGY 83, 35-47
• Kralova, J., Rackova, L., Pekarova, M., Kubala, L., Nosal', R., Jancinova, V., Ciz, M., Lojek, A. (2009 ), The effects of H-1-antihistamines on the nitric oxide production by RAW 264.7 cells with respect to their lipophilicity, INTERNATIONAL IMMUNOPHARMACOLOGY 9, 990-995
• Hajkova, V., Svobodova, A., Krejcova, D., Ciz, M., Velebny, V., Lojek, A., El-Benna, J., Kubala, L. (2009 ), Soluble glucomannan isolated from Candida utilis primes blood phagocytes, CARBOHYDRATE RESEARCH 344, 2036-2041
• Stixova, L., Prochazkova, J., Soucek, K., Hofmanova, J., Kozubik, A. (2009 ), 5-Lipoxygenase inhibitors potentiate 1 alpha,25-dihydroxyvitamin D-3-induced monocytic differentiation by activating p38 MAPK pathway, MOLECULAR AND CELLULAR BIOCHEMISTRY 330, 229-238
• Heyrovska, R. (2009 ), Absolute Potentials of the Hydrogen Electrode and of AqueousRedox Couples, ELECTROCHEMICAL AND SOLID STATE LETTERS 12, F29-F30
• Markova, M., Vyskot, B. (2009 ), New Horizons of Genomic in situ Hybridization, CYTOGENETIC AND GENOME RESEARCH 126, 368-375
• Rotkova, G., Sykorova, E., Fajkus, J. (2009 ), Protect and regulate: Recent findings on plant POT1-like proteins, BIOLOGIA PLANTARUM 53, 1-4
• Fojt, L., Klapetek, P., Strasak, L., Vetterl, V. (2009 ), 50 Hz magnetic field effect on the morphology of bacteria, MICRON 40, 918-922
• Pekarova, M., Kralova, J., Kubala, L., Ciz, M., Papezikova, I., Macickova, T., Pecivova, J., Nosal, R., Lojek, A. (2009 ), CARVEDILOL AND ADRENERGIC AGONISTS SUPPRESS THE LIPOPOLYSACCHARIDE-INDUCED NO PRODUCTION IN RAW 264.7 MACROPHAGES VIA THE ADRENERGIC RECEPTORS, JOURNAL OF PHYSIOLOGY AND PHARMACOLOGY 60, 143-150
• Hofer, M., Vacek, A., Pospisil, M., Hola, J., Streitova, D., Znojil, V. (2009 ), Activation of Adenosine A(3) Receptors Potentiates Stimulatory Effects of IL-3, SCF, and GM-CSF on Mouse Granulocyte-Macrophage Hematopoietic Progenitor Cells, PHYSIOLOGICAL RESEARCH 58, 247-252
• Starsichova, A., Kubala, L., Lincova, E., Pernicova, Z., Kozubik, A., Soucek, K. (2009 ), Dynamic Monitoring of Cellular Remodeling Induced by the Transforming Growth Factor-beta 1, BIOLOGICAL PROCEDURES ONLINE 11, 316-324
• Brazda, V., Jagelska, EB., Liao, JCC., Arrowsmith, CH. (2009 ), The Central Region of BRCA1 Binds Preferentially to Supercoiled DNA, JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 27, 97-103
• Palecek, E., Heyrovsky, M., Janik, B., Kalab, D., Pechan, Z. (2009 ), FROM DC POLAROGRAPHIC PRESODIUM WAVE OF PROTEINS TO ELECTROCHEMISTRY OF BIOMACROMOLECULES, COLLECTION OF CZECHOSLOVAK CHEMICAL COMMUNICATIONS 74, 1739-1755
• Vacek, J., Havran, L., Fojta, M. (2009 ), THE REDUCTION OF DOXORUBICIN AT A MERCURY ELECTRODE AND MONITORING ITS INTERACTION WITH DNA USING CONSTANT CURRENT CHRONOPOTENTIOMETRY, COLLECTION OF CZECHOSLOVAK CHEMICAL COMMUNICATIONS 74, 1727-1738
• Fojt, L., Vetterl, V., Doneux, T. (2009 ), TWO-DIMENSIONAL CONDENSATION OF NUCLEOBASES: A COMPARATIVE STUDY OF HALOGEN DERIVATIVES OF CYTOSINE, COLLECTION OF CZECHOSLOVAK CHEMICAL COMMUNICATIONS 74, 1611-1622
• Hofer, M., Pospisil, M., Vacek, A., Znojil, V., Hola, J., Streitova, D. (2009 ), Meloxicam Elevates Serum Concentration of Erythropoietin and Numbers of Bone Marrow Erythroid Progenitor Cells in Sublethally Gamma-Irradiated Mice, ACTA VETERINARIA BRNO 78, 19-22
• Kypr, J., Kejnovska, I., Renciuk, D., Vorlickova, M. (2009 ), Circular dichroism and conformational polymorphism of DNA, NUCLEIC ACIDS RESEARCH 37, 1713-1725
• Renciuk, D., Kejnovska, I., Skolakova, P., Bednarova, K., Motlova, J., Vorlickova, M. (2009 ), Arrangements of human telomere DNA quadruplex in physiologically relevant K+ solutions, NUCLEIC ACIDS RESEARCH 37, 6625-6634
• Dorcak, V., Palecek, E. (2009 ), Electrochemical Determination of Thioredoxin Redox States, ANALYTICAL CHEMISTRY 81, 1543-1548
• Morgado, CA., Jurecka, P., Svozil, D., Hobza, P., Sponer, J. (2009 ), Balance of Attraction and Repulsion in Nucleic-Acid Base Stacking: CCSD(T)/Complete-Basis-Set-Limit Calculations on Uracil Dimer and a Comparison with the Force-Field Description, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 5, 1524-1544
• Sponer, J., Zgarbova, M., Jurecka, P., Riley, KE., Sponer, JE., Hobza, P. (2009 ), Reference Quantum Chemical Calculations on RNA Base Pairs Directly Involving the 2 '-OH Group of Ribose, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 5, 1166-1179
• Fadrna, E., Spackova, N., Sarzynska, J., Koca, J., Orozco, M., Cheatham, TE., Kulinski, T., Sponer, J. (2009 ), Single Stranded Loops of Quadruplex DNA As Key Benchmark for Testing Nucleic Acids Force Fields, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 5, 2514-2530
• Krejci, J., Uhlirova, R., Galiova, G., Kozubek, S., Smigova, J., Bartova, E. (2009 ), Genome-Wide Reduction in H3K9 Acetylation During Human Embryonic Stem Cell Differentiation, JOURNAL OF CELLULAR PHYSIOLOGY 219, 677-687
• Strasak, L., Bartova, E., Harnicarova, A., Galiova, G., Krejci, J., Kozubek, S. (2009 ), H3K9 Acetylation and Radial Chromatin Positioning, JOURNAL OF CELLULAR PHYSIOLOGY 220, 91-101
• Novakova, O., Nazarov, AA., Hartinger, CG., Keppler, BK., Brabec, V. (2009 ), DNA interactions of dinuclear Ru-II arene antitumor complexes in cell-free media, BIOCHEMICAL PHARMACOLOGY 77, 364-374
• Palecek, E., Trefulka, M., Fojta, M. (2009 ), End-labeling of peptide nucleic acid with osmium complex. Voltammetry at carbon and mercury electrodes, ELECTROCHEMISTRY COMMUNICATIONS 11, 359-362
• Humpolikova-Adamkova, L., Kovarik, J., Dusek, L., Lauerova, L., Boudny, V., Fait, V., Fojtova, M., Krejci, E., Kovarik, A. (2009 ), Interferon-alpha treatment may negatively influence disease progression in melanoma patients by hyperactivation of STAT3 protein, EUROPEAN JOURNAL OF CANCER 45, 1315-1323
• Renciuk, D., Zemanek, M., Kejnovska, I., Vorlickova, M. (2009 ), Quadruplex-forming properties of FRAXA (CGG) repeats interrupted by (AGG) triplets, BIOCHIMIE 91, 416-422
• Tomasko, M., Vorlickova, M., Sagi, J. (2009 ), Substitution of adenine for guanine in the quadruplex-forming human telomere DNA sequence G(3)(T(2)AG(3))(3), BIOCHIMIE 91, 171-179
• Trefulka, M., Palecek, E. (2009 ), Voltammetry of Os(VI)-Modified Polysaccharides at Carbon Electrodes, ELECTROANALYSIS 21, 1763-1766
• Krejci, J., Harnicarova, A., Streitova, D., Hajek, R., Pour, L., Kozubek, S., Bartova, E. (2009 ), Epigenetics of multiple myeloma after treatment with cytostatics and gamma radiation, LEUKEMIA RESEARCH 33, 1490-1498
• Legartova, S., Krejci, J., Harnicarova, A., Hajek, R., Kozubek, S., Bartova, E. (2009 ), Nuclear topography of the 1q21 genomic region and Mcl-1 protein levels associated with pathophysiology of multiple myeloma, NEOPLASMA 56, 404-413
• Souckova, K., Kovarik, A., Dusek, L., Humpolikova-Adamkova, L., Lauerova, L., Krejci, E., Matouskova, E., Bursikova, E., Fojtova, M., Kovarik, J. (2009 ), Reduced inducibility of SOCS3 by interferon gamma associates with higher resistance of human breast cancer lines as compared to normal mammary epithelial cells, NEOPLASMA 56, 379-386
• Krejcova, D., Prochazkova, J., Kubala, L., Pachernik, J. (2009 ), Modulation of cell proliferation and differentiation of human lung carcinoma cells by the interferon-alpha, GENERAL PHYSIOLOGY AND BIOPHYSICS 28, 294-301
• Strasak, L., Bartova, E., Krejci, J., Fojt, L., Vetterl, V. (2009 ), Effects of ELF-EMF on Brain Proteins in Mice, ELECTROMAGNETIC BIOLOGY AND MEDICINE 28, 96-104

2008

• Malina, J., Hannon, MJ., Brabec, V. (2008 ), DNA binding of dinuclear iron(II) metallosupramolecular cylinders. DNA unwinding and sequence preference, NUCLEIC ACIDS RESEARCH 36, 3630-3638
• Lunerova-Bedrichova, J., Bleys, A., Fojtova, M., Khaitova, L., Depicker, A., Kovarik, A. (2008 ), Trans-generation inheritance of methylation patterns in a tobacco transgene following a post-transcriptional silencing event, PLANT JOURNAL 54, 1049-1062
• Malina, J., Hannon, MJ., Brabec, V. (2008 ), Interaction of Dinuclear Ruthenium(II) Supramolecular Cylinders with DNA: Sequence-Specific Binding, Unwinding, and Photocleavage, CHEMISTRY-A EUROPEAN JOURNAL 14, 10408-10414
• Sponer, JE., Sumpter, BG., Leszczynski, J., Sponer, J., Fuentes-Cabrera, M. (2008 ), Theoretical Study on the Factors Controlling the Stability of the Borate Complexes of Ribose, Arabinose, Lyxose, and Xylose, CHEMISTRY-A EUROPEAN JOURNAL 14, 9990-9998
• Kasparkova, J., Vojtiskova, M., Natile, G., Brabec, V. (2008 ), Unique properties of DNA interstrand cross-links of antitumor oxaliplatin and the effect of chirality of the carrier ligand, CHEMISTRY-A EUROPEAN JOURNAL 14, 1330-1341
• Hason, S., Pivonkova, H., Vetterl, V., Fojta, M. (2008 ), Label-free sequence-specific DNA sensing using copper-enhanced anodic stripping of purine bases at boron-doped diamond electrodes, ANALYTICAL CHEMISTRY 80, 2391-2399
• Fojta, M., Billova, S., Havran, L., Pivonkova, H., Cernocka, H., Horakova, P., Palecek, E. (2008 ), Osmium tetroxide, 2,2 '-bipyridine: Electroactive marker for probing accessibility of tryptophan residues in proteins, ANALYTICAL CHEMISTRY 80, 4598-4605
• Jagelska, EB., Brazda, V., Pecinka, P., Palecek, E., Fojta, M. (2008 ), DNA topology influences p53 sequence-specific DNA binding through structural transitions within the target sites, BIOCHEMICAL JOURNAL 412, 57-63
• Bugarcic, T., Novakova, O., Halamikova, A., Zerzankova, L., Vrana, O., Kasparkova, J., Habtemariam, A., Parsons, S., Sadler, PJ., Brabec, V. (2008 ), Cytotoxicity, cellular uptake, and DNA interactions of new monodentate ruthenium(II) complexes containing terphenyl arenes, JOURNAL OF MEDICINAL CHEMISTRY 51, 5310-5319
• Kostrhunova, H., Florian, J., Novakova, O., Peacock, AFA., Sadler, PJ., Brabec, V. (2008 ), DNA interactions of monofunctional organometallic osmium(II) antitumor complexes in cell-free media, JOURNAL OF MEDICINAL CHEMISTRY 51, 3635-3643
• Kasparkova, J., Marini, V., Bursova, V., Brabec, V. (2008 ), Biophysical Studies on the Stability of DNA Intrastrand Cross-Links of Transplatin, BIOPHYSICAL JOURNAL 95, 4361-4371
• Falk, M., Lukasova, E., Kozubek, S. (2008 ), Chromatin structure influences the sensitivity of DNA to gamma-radiation, BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 1783, 2398-2414
• Kovarik, A., Werlemark, G., Leitch, AR., Souckova-Skalicka, K., Lim, YK., Khaitova, L., Koukalova, B., Nybom, H. (2008 ), The asymmetric meiosis in pentaploid dogroses (Rosa sect. Caninae) is associated with a skewed distribution of rRNA gene families in the gametes, HEREDITY 101, 359-367
• Mrackova, M., Nicolas, M., Hobza, R., Negrutiu, I., Moneger, F., Widmer, A., Vyskot, B., Janousek, B. (2008 ), Independent origin of sex chromosomes in two species of the genus Silene, GENETICS 179, 1129-1133
• Havran, L., Vacek, J., Cahova, K., Fojta, M. (2008 ), Sensitive voltammetric detection of DNA damage at carbon electrodes using DNA repair enzymes and an electroactive osmium marker, ANALYTICAL AND BIOANALYTICAL CHEMISTRY 391, 1751-1758
• Banas, P., Rulisek, L., Hanosova, V., Svozil, D., Walter, NG., Sponer, J., Otyepka, M. (2008 ), General base catalysis for cleavage by the active-site cytosine of the hepatitis delta virus ribozyme: QM/MM calculations establish chemical feasibility, JOURNAL OF PHYSICAL CHEMISTRY B 112, 11177-11187
• Castellano-Castillo, M., Kostrhunova, H., Marini, V., Kasparkova, J., Sadler, PJ., Malinge, JM., Brabec, V. (2008 ), Binding of mismatch repair protein MutS to mispaired DNA adducts of intercalating ruthenium(II) arene complexes, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 13, 993-999
• Hason, S., Vetterl, V., Fojta, M. (2008 ), Two-dimensional condensation of pyrimidine oligonucleotides during their self-assemblies at mercury based surfaces, ELECTROCHIMICA ACTA 53, 2818-2824
• Machala, M., Svihalkova-Sindlerova, L., Pencikova, K., Krcmar, P., Topinka, J., Milcova, A., Novakova, Z., Kozubik, A., Vondracek, J. (2008 ), Effects of methylated chrysenes on AhR-dependent and -independent toxic events in rat liver epithelial cells, TOXICOLOGY 247, 93-101
• Umannova, L., Neca, J., Andrysik, Z., Vondracek, J., Upham, BL., Trosko, JE., Hofmanova, J., Kozubik, A., Machala, M. (2008 ), Non-dioxin-like polychlorinated biphenyls induce a release of arachidonic acid in liver epithelial cells: A partial role of cytosolic phospholipase A(2) and extracellular signal-regulated kinases 1/2 signalling, TOXICOLOGY 247, 55-60
• Hyzd'alova, M., Hofmanova, J., Pachernik, J., Vaculova, A., Kozubik, A. (2008 ), The interaction of butyrate with TNF-alpha during differentiation and apoptosis of colon epithelial cells: Role of NF-kappa B activation, CYTOKINE 44, 33-43
• Hofer, M., Pospisil, M., Hola, J., Vacek, A., Streitova, D., Znojil, V. (2008 ), Inhibition of Cyclooxygenase 2 in Mice Increases Production of G-CSF and Induces Radioprotection, RADIATION RESEARCH 170, 566-571
• Hofer, M., Pospisil, M., Znojil, V., Hola, J., Streitova, D., Vacek, A. (2008 ), Homeostatic action of adenosine A(3) and A(1) receptor agonists on proliferation of hematopoietic precursor cells, EXPERIMENTAL BIOLOGY AND MEDICINE 233, 897-900
• Ostatna, V., Kuralay, F., Trnkova, L., Palecek, E. (2008 ), Constant current chronopotentiometry and voltammetry of native and denatured serum albumin at mercury and carbon electrodes, ELECTROANALYSIS 20, 1406-1413
• Kubala, L., Lu, G., Baldus, S., Berglund, L., Eiserich, JP. (2008 ), Plasma levels of myeloperoxidase are not elevated in patients with stable coronary artery disease, CLINICA CHIMICA ACTA 394, 59-62
• Fojta, M., Jelen, F., Havran, L., Palecek, E. (2008 ), Electrochemical stripping techniques in analysis of nucleic acids and their constituents, CURRENT ANALYTICAL CHEMISTRY 4, 250-262
• Siroky, J. (2008 ), Chromosome landmarks as tools to study the genome of Arabidopsis thaliana, CYTOGENETIC AND GENOME RESEARCH 120, 202-209
• Siroky, J. (2008 ), Cytogenetics for the study of telomere function in plants, CYTOGENETIC AND GENOME RESEARCH 122, 374-379
• Kubat, Z., Hobza, R., Vyskot, B., Kejnovsky, E. (2008 ), Microsatellite accumulation on the Y chromosome in Silene latifolia, GENOME 51, 350-356
• Hofmanova, J., Vaculova, A., Hyzd'Alova, M., Kozubik, A. (2008 ), Response of normal and colon cancer epithelial cells to TNF-family apoptotic inducers, ONCOLOGY REPORTS 19, 567-573
• Hofer, M., Pospisil, M., Znojil, V., Hola, J., Vacek, A., Streitova, D. (2008 ), Meloxicam, an inhibitor of cyclooxygenase-2, increases the level of serum G-CSF and might be usable as an auxiliary means in G-CSF therapy, PHYSIOLOGICAL RESEARCH 57, 307-310
• Hobza, R., Widmer, A. (2008 ), Efficient molecular sexing in dioecious Silene latifolia and S-dioica and paternity analysis in F-1 hybrids, MOLECULAR ECOLOGY RESOURCES 8, 1274-1276
• Lojek, A., Pecivova, J., Macickova, T., Nosal, R., Papezikova, I., Ciz, M. (2008 ), Effect of carvedilol on the production of reactive oxygen species by HL-60 cells, NEUROENDOCRINOLOGY LETTERS 29, 779-783
• Papezikova, I., Pekarova, M., Chatzopoulou, M., Nicolaou, I., Demopoulos, V., Kubala, L., Lojek, A. (2008 ), The effect of aldose reductase inhibition by JMC-2004 on hyperglycemia-induced endothelial dysfunction, NEUROENDOCRINOLOGY LETTERS 29, 775-778
• Vondruskova, J., Kypr, J., Kejnovska, I., Fialova, M., Vorlickova, M. (2008 ), Guanine quadruplex formation by RNA/DNA hybrid analogs of Oxytricha telomere G(4)T(4)G(4) fragment, BIOPOLYMERS 89, 797-806
• Vondruskova, J., Kypr, J., Kejnovska, I., Fialova, M., Vorlickova, M. (2008 ), Role of loops in the guanine quadruplex formation by DNA/RNA hybrid analogs of G(4)T(4)G(4), INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES 43, 463-467
• Hrabcova, I., Kypr, J. (2008 ), The longest (A+T) and (G+C) blocks in the human and other genomes, JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 25, 337-345
• Cahova, H., Havran, L., Brazdilova, P., Pivonkova, H., Pohl, R., Fojta, M., Hocek, M. (2008 ), Aminophenyl- and nitrophenyl-labeled nucleoside triphosphates: Synthesis, enzymatic incorporation, and electrochemical detection, ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 47, 2059-2062
• Lochmanova, G., Zdrahal, Z., Konecna, H., Koukalova, S., Malbeck, J., Soucek, P., Valkova, M., Kiran, NS., Brzobohaty, B. (2008 ), Cytokinin-induced photomorphogenesis in dark-grown Arabidopsis: a proteomic analysis, JOURNAL OF EXPERIMENTAL BOTANY 59, 3705-3719
• Umannova, L., Machala, M., Topinka, J., Novakova, Z., Milcova, A., Kozubik, A., Vondracek, J. (2008 ), Tumor necrosis factor-alpha potentiates genotoxic effects of benzo[a]pyrene in rat liver epithelial cells through upregulation of cytochrome P4501B1 expression, MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS 640, 162-169
• Galiova, G., Bartova, E., Raska, I., Krejci, J., Kozubek, S. (2008 ), Chromatin changes induced by lamin A/C deficiency and the histone deacetylase inhibitor trichostatin A, EUROPEAN JOURNAL OF CELL BIOLOGY 87, 291-303
• Bartova, E., Krejci, J., Harnicarova, A., Kozubek, S. (2008 ), Differentiation of human embryonic stem cells induces condensation of chromosome territories and formation of heterochromatin protein 1 foci, DIFFERENTIATION 76, 24-32
• Palecek, E., Ostatna, V., Masarik, M., Bertoncini, CW., Jovin, TM. (2008 ), Changes in interfacial properties of alpha-synuclein preceding its aggregation, ANALYST 133, 76-84
• Bartova, E., Harnicarova, A., Krejci, J., Strasak, L., Kozubek, S. (2008 ), Single-cell c-myc gene expression in relationship to nuclear domains, CHROMOSOME RESEARCH 16, 325-343
• Cermak, T., Kubat, Z., Hobza, R., Koblizkova, A., Widmer, A., Macas, J., Vyskot, B., Kejnovsky, E. (2008 ), Survey of repetitive sequences in Silene latifolia with respect to their distribution on sex chromosomes, CHROMOSOME RESEARCH 16, 961-976
• Dopitova, R., Mazura, P., Janda, L., Chaloupkova, R., Jerabek, P., Damborsky, J., Filipi, T., Kiran, NS., Brzobohaty, B. (2008 ), Functional analysis of the aglycone-binding site of the maize beta-glucosidase Zm-p60.1, FEBS JOURNAL 275, 6123-6135
• Bartova, E., Galiova, G., Krejci, J., Harnicarova, A., Strasak, L., Kozubek, S. (2008 ), Epigenome and Chromatin Structure in Human Embryonic Stem Cells Undergoing Differentiation, DEVELOPMENTAL DYNAMICS 237, 3690-3702
• Bartova, E., Krejci, J., Harnicarova, A., Galiova, G., Kozubek, S. (2008 ), Histone modifications and nuclear architecture: A review, JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY 56, 711-721
• Krejci, J., Harnicarova, A., Kurova, J., Uhlirova, R., Kozubek, S., Legartova, S., Hajek, R., Bartova, E. (2008 ), Nuclear organization of PML bodies in leukaemic and multiple myeloma cells, LEUKEMIA RESEARCH 32, 1866-1877
• Ondrej, V., Lukasova, E., Krejci, J., Matula, P., Kozubek, S. (2008 ), Lamin A/C and Polymeric Actin in Genome Organization, MOLECULES AND CELLS 26, 356-361
• Horakova-Brazdilova, P., Fojtova, M., Vytras, K., Fojta, M. (2008 ), Enzyme-linked electrochemical detection of PCR-amplified nucleotide sequences using disposable screen-printed sensors. Applications in gene expression monitoring, SENSORS 8, 193-210
• Ciz, M., Pavelkova, M., Gallova, L., Kralova, J., Kubala, L., Lojek, A. (2008 ), The influence of wine polyphenols on reactive oxygen and nitrogen species production by murine macrophages RAW 264.7, PHYSIOLOGICAL RESEARCH 57, 393-402
• Konopka, R., Kubala, L., Lojek, A., Pachernik, J. (2008 ), Alternation of retinoic acid induced neural differentiation of P19 embryonal carcinoma cells by reduction of reactive oxygen species intracellular production, NEUROENDOCRINOLOGY LETTERS 29, 770-774
• Krejci, J., Pachernik, J., Hampl, A., Dvorak, P. (2008 ), In vitro labelling of mouse embryonic stem cells with SPIO nanoparticles, GENERAL PHYSIOLOGY AND BIOPHYSICS 27, 164-173

2007

• Hobza, R., Vyskot, B. (2007 ), Laser micro dissection-based analysis of plant sex chromosomes, LASER MANIPULATION OF CELLS AND TISSUES 82, 433-453
• Razga, F., Koca, J., Mokdad, A., Sponer, J. (2007 ), Elastic properties of ribosomal RNA building blocks: molecular dynamics of the GTPase-associated center rRNA, NUCLEIC ACIDS RESEARCH 35, 4007-4017
• Stros, M., Bacikova, A., Polanska, E., Stokrova, J., Strauss, F. (2007 ), HMGB1 interacts with human topoisomerase II alpha and stimulates its catalytic activity, NUCLEIC ACIDS RESEARCH 35, 5001-5013
• Chvalova, K., Brabec, V., Kasparkova, J. (2007 ), Mechanism of the formation of DNA-protein cross-links by antitumor cisplatin, NUCLEIC ACIDS RESEARCH 35, 1812-1821
• Stros, M., Launholt, D., Grasser, KD. (2007 ), The HMG-box: a versatile protein domain occurring in a wide variety of DNA-binding proteins, CELLULAR AND MOLECULAR LIFE SCIENCES 64, 2590-2606
• Dadejova, M., Lim, KY., Souckova-Skalicka, K., Matyasek, R., Grandbastien, MA., Leitch, A., Kovarik, A. (2007 ), Transcription activity of rRNA genes correlates with a tendency towards intergenomic homogenization in Nicotiana allotetraploids, NEW PHYTOLOGIST 174, 658-668
• Malina, J., Hannon, MJ., Brabec, V. (2007 ), Recognition of DNA three-way junctions by metallosupramolecular cylinders: Gel electrophoresis studies, CHEMISTRY-A EUROPEAN JOURNAL 13, 3871-3877
• Malina, J., Novakova, O., Vojtiskova, M., Natile, G., Brabec, V. (2007 ), Conformation of DNA GG intrastrand cross-link of antitumor oxaliplatin and its enantiomeric analog, BIOPHYSICAL JOURNAL 93, 3950-3962
• Reblova, K., Fadrna, E., Sarzynska, J., Kulinski, T., Kulhanek, P., Ennifar, E., Koca, J., Sponer, J. (2007 ), Conformations of flanking bases in HIV-1 RNA DIS kissing complexes studied by molecular dynamics, BIOPHYSICAL JOURNAL 93, 3932-3949
• Falk, M., Lukasova, E., Gabrielova, B., Ondrej, V., Kozubek, S. (2007 ), Chromatin dynamics during DSB repair, BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 1773, 1534-1545
• Brabec, V., Christofis, P., Slamova, M., Kostrhunova, H., Novakova, O., Najajreh, Y., Gibson, D., Kagparkova, J. (2007 ), DNA interactions of new cytotoxic tetrafunctional dinuidear platinum complex trans,trans-[{PtCl2(NH3)}(2)(piperazine)], BIOCHEMICAL PHARMACOLOGY 73, 1887-1900
• Zatloukalova, J., Svihalkova-Sindlerova, L., Kozubik, A., Krcmar, P., Machala, M., Vondracek, J. (2007 ), beta-naphthoflavone and 3 '-methoxy-4 '-nitroflavone exert ambiguous effects on Ah receptor-dependent cell proliferation and gene expression in rat liver 'stem-like' cells, BIOCHEMICAL PHARMACOLOGY 73, 1622-1634
• Matyasek, R., Tate, JA., Lim, YK., Srubarova, H., Koh, J., Leitch, AR., Soltis, DE., Soltis, PS., Kovarik, A. (2007 ), Concerted evolution of rDNA in recently formed tragopogon allotetraploids is typically associated with an inverse correlation between gene copy number and expression, GENETICS 176, 2509-2519
• Halamikova, A., Vrana, D., Kasparkova, J., Brabec, V. (2007 ), Biochemical studies of the thermal effects on DNA modifications by the antitumor cisplatin and their repair, CHEMBIOCHEM 8, 2008-2015
• Sponer, J., Spackova, N. (2007 ), Molecular dynamics simulations and their application to four-stranded DNA, METHODS 43, 278-290
• Selesovska-Fadrna, R., Fojta, M., Navratil, T., Chylkova, J. (2007 ), Brdicka-type processes of cysteine and cysteine-containing peptides on silver amalgam electrodes, ANALYTICA CHIMICA ACTA 582, 344-352
• Sponer, JE., Reblova, K., Mokdad, A., Sychrovsky, V., Leszczynski, J., Sponer, J. (2007 ), Leading RNA tertiary interactions: Structures, energies, and water insertion of a-minor and p-interactions. A quantum chemical view, JOURNAL OF PHYSICAL CHEMISTRY B 111, 9153-9164
• Markova, M., Michu, E., Vyskot, B., Janousek, B., Zluvova, J. (2007 ), An interspecific hybrid as a tool to study phylogenetic relationships in plants using the GISH technique, CHROMOSOME RESEARCH 15, 1051-1059
• Horvath, V., Soucek, K., Svihalkova-Sindlerova, L., Vondracek, J., Blanarova, O., Hofmanova, J., Sova, P., Kozubik, A. (2007 ), Different cell cycle modulation following treatment of human ovarian carcinoma cells with a new platinum(IV) complex vs cisplatin, INVESTIGATIONAL NEW DRUGS 25, 435-443
• Moriarity, B., Novakova, O., Farrell, N., Brabec, V., Kasparkova, J. (2007 ), 1,2-GG intrastrand cross-link of antitumor dinuclear bifunctional platinum compound with spermidine linker inhibits DNA polymerization more effectively than the cross-link of conventional cisplatin, ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 459, 264-272
• Dorcak, V., Palecek, E. (2007 ), Chronopotentiometric determination of redox states of peptides, ELECTROANALYSIS 19, 2405-2412
• Trefulka, M., Ostatna, V., Havran, L., Fojta, M., Palecek, E. (2007 ), Covalent labeling of nucleosides with VIII- and VI-valent osmium complexes, ELECTROANALYSIS 19, 1281-1287
• Vacek, J., Mozga, T., Cahova, K., Pivonkova, H., Fojta, M. (2007 ), Electrochemical sensing of chromium-induced DNA damage: DNA strand breakage by intermediates of Chromium(VI) electrochemical reduction, ELECTROANALYSIS 19, 2093-2102
• Trefulka, M., Ferreyra, N., Ostatna, V., Fojta, M., Rivas, G., Palecek, E. (2007 ), Voltammetry of osmium end-labeled oligodeoxynucleotides at carbon, mercury, and gold electrodes, ELECTROANALYSIS 19, 1334-1338
• Kypr, J., Kejnovska, I., Vorlickova, M. (2007 ), Conformations of DNA strands containing GAGT, GACA, or GAGC Tetranucleotide repeats, BIOPOLYMERS 87, 218-224
• Vorlickova, M., Bednarova, K., Kejnovska, I., Kypr, J. (2007 ), Intramolecular and intermolecular guanine quadruplexes of DNA in aqueous salt and ethanol solutions, BIOPOLYMERS 86, 1-10
• Kejnovska, I., Kypr, J., Vondruskova, J., Vorlickova, M. (2007 ), Towards a better understanding of the unusual conformations of the alternating guanine-adenine repeat strands of DNA, BIOPOLYMERS 85, 19-27
• Fulnecek, J., Kovarik, A. (2007 ), Low abundant spacer 5S rRNA transcripts are frequently polyadenylated in Nicotiana, MOLECULAR GENETICS AND GENOMICS 278, 565-573
• Hobza, R., Kejnovsky, E., Vyskot, B., Widmer, A. (2007 ), The role of chromosomal rearrangements in the evolution of Silene latifolia sex chromosomes, MOLECULAR GENETICS AND GENOMICS 278, 633-638
• Kejnovska, I., Kypr, J., Vorlickova, M. (2007 ), Oligo(dT) is not a correct native PAGE marker for single-stranded DNA, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 353, 776-779
• Hradilova, J., Malbeck, J., Brzobohaty, B. (2007 ), Cytokinin regulation of gene expression in the AHP gene family in Arabidopsis thaliana, JOURNAL OF PLANT GROWTH REGULATION 26, 229-244
• Heyrovska, R. (2007 ), Dependences of molar volumes in solids, partial molal and hydrated ionic volumes of alkali halides on covalent and ionic radii and the golden ratio, CHEMICAL PHYSICS LETTERS 436, 287-293
• Nejedly, K., Chladkova, J., Kypr, J. (2007 ), Photochemical probing of the B-A conformational transition in a linearized pUC19 DNA and its polylinker region, BIOPHYSICAL CHEMISTRY 125, 237-246
• Ciz, M., Komrskova, D., Pracharova, L., Okenkova, K., Cizova, H., Moravcova, A., Jancinova, V., Petrikova, M., Lojek, A., Nosal, R. (2007 ), Serotonin modulates the oxidative burst of human phagocytes via various mechanisms, PLATELETS 18, 583-590
• Hofer, M., Pospisil, M., Znojil, V., Hola, J., Vacek, A., Streitova, D. (2007 ), Adenosine A(3) receptor agonist acts as a homeostatic regulator of bone marrow hematopoiesis, BIOMEDICINE & PHARMACOTHERAPY 61, 356-359
• Vacek, A., Hofer, M., Hola, J., Weiterova, L., Streitova, D., Svoboda, J. (2007 ), The role of G-CSF and IL-6 in the granulopoiesis-stimulating activity of murine blood serum induced by perorally administered ultrafiltered pig leukocyte extract, IMUNOR (R), INTERNATIONAL IMMUNOPHARMACOLOGY 7, 656-661
• Hradilova, J., Brzobohaty, B. (2007 ), Expression pattern of the AHP gene family from Arabidopsis thaliana and organ specific alternative splicing in the AHP5 gene, BIOLOGIA PLANTARUM 51, 257-267
• Skalnikova, M., Bartova, E., Ulman, V., Matula, P., Svoboda, D., Harnicarova, A., Kozubek, M., Kozubek, S. (2007 ), Distinct patterns of histone methylation and acetylation in human interphase nuclei, PHYSIOLOGICAL RESEARCH 56, 797-806
• Weiterova, L., Hofer, M., Pospisil, M., Znojil, V., Streitova, D. (2007 ), Drugs elevating extracellular adenosine administered in vivo induce serum colony-stimulating activity and interleukin-6 in mice, PHYSIOLOGICAL RESEARCH 56, 463-473
• Soska, V., Ciz, M., Kubala, L., Sobotova, D., Lojek, A. (2007 ), Phagocyte-derived oxidants and plasma antioxidants in haemodialysed patients, SCANDINAVIAN JOURNAL OF CLINICAL & LABORATORY INVESTIGATION 67, 343-351
• Ondrej, V., Lukasova, E., Falk, M., Kozubek, S. (2007 ), The role of actin and microtubule networks in plasmid DNA intracellular trafficking, ACTA BIOCHIMICA POLONICA 54, 657-663
• Vondruskova, J., Parizkova, N., Kypr, J. (2007 ), Factors influencing DNA expansion in the course of polymerase chain reaction, NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 26, 65-82
• Dorcak, V., Mader, P., Vesela, V., Fedurco, M., Sestakova, I. (2007 ), Oxidizability of cysteine and short cysteine-containing peptides by molecular oxygen, CHEMIA ANALITYCZNA 52, 979-988
• Fojta, M., Kostecka, P., Trefulka, MR., Havran, L., Palecek, E. (2007 ), Multicolor electrochemical labeling of DNA hybridization probes with osmium tetroxide complexes, ANALYTICAL CHEMISTRY 79, 1022-1029
• Umannova, L., Zatloukalova, J., Machala, M., Krcmar, P., Majkova, Z., Hennig, B., Kozubik, A., Vondracek, J. (2007 ), Tumor necrosis factor-alpha modulates effects of aryl hydrocarbon receptor ligands on cell proliferation and expression of cytochrome P450 enzymes in rat liver "stem-like" cells, TOXICOLOGICAL SCIENCES 99, 79-89
• Soucek, P., Klima, P., Rekova, A., Brzobohaty, B. (2007 ), Involvement of hormones and KNOXI genes in early Arabidopsis seedling development, JOURNAL OF EXPERIMENTAL BOTANY 58, 3797-3810
• Fojtova, M., Piskala, A., Votruba, I., Otmar, M., Bartova, E., Kovarik, A. (2007 ), Efficacy of DNA hypomethylating capacities of 5-aza-2 '-deoxycytidine and its alpha anomer, PHARMACOLOGICAL RESEARCH 55, 16-22
• Vrana, O., Masek, V., Drazan, V., Brabec, V. (2007 ), Raman spectroscopy of DNA modified by intrastrand cross-links of antitumor cisplatin, JOURNAL OF STRUCTURAL BIOLOGY 159, 1-8
• Andrysik, Z., Vondracek, J., Machala, M., Krcmar, P., Svihalkova-Sindlerova, L., Kranz, A., Weiss, C., Faust, D., Kozubik, A., Dietrich, C. (2007 ), The aryl hydrocarbon receptor-dependent deregulation of cell cycle control induced by polycyclic aromatic hydrocarbons in rat liver epithelial cells, MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS 615, 87-97
• Palecek, E., Fojta, M. (2007 ), Magnetic beads as versatile tools for electrochemical DNA and protein biosensing, TALANTA 74, 276-290
• Svihalkova-Sindlerova, L., Machala, M., Pencikova, K., Marvanova, S., Neca, J., Topinka, J., Sevastyanova, O., Kozubik, A., Vondracek, J. (2007 ), Dibenzanthracenes and benzochrysenes elicit both genotoxic and nongenotoxic events in rat liver 'stem-like' cells, TOXICOLOGY 232, 147-159
• Bartova, E., Pachernik, J., Kozubik, A., Kozubek, S. (2007 ), Differentiation-specific association of HP1 alpha and HP1 beta with chromocentres is correlated with clustering of TIF1 beta at these sites, JOURNAL OF HISTOCHEMISTRY AND CELL BIOLOGY 127, 375-388
• Palecek, E., Ostatna, V. (2007 ), Electroactivity of nonconjugated proteins and peptides. Towards electroanalysis of all proteins, ELECTROANALYSIS 19, 2383-2403
• Hofer, M., Vacek, A., Lojek, A., Hola, J., Streitova, D. (2007 ), Ultrafiltered pig leukocyte extract (IMUNOR (R)) decreases nitric oxide formation and hematopoiesis-stimulating cytokine production in lipopolysaccharide-stimulated RAW 264.7 macrophages, INTERNATIONAL IMMUNOPHARMACOLOGY 7, 1369-1374
• Streitova, D., Weiterova, L., Hofer, M., Hola, J., Horvath, V., Kozubik, A., Znojil, V. (2007 ), Effect of adenosine on the growth of human T-lymphocyte leukemia cell line MOLT-4, CANCER INVESTIGATION 25, 419-426

2006

• Fojtova, M., Bleys, A., Bedrichova, J., Van Houdt, H., Krizova, K., Depicker, A., Kovarik, A. (2006 ), The trans-silencing capacity of invertedly repeated transgenes depends on their epigenetic state in tobacco, NUCLEIC ACIDS RESEARCH 34, 2280-2293
• Razga, F., Zacharias, M., Reblova, K., Koca, J., Sponer, J. (2006 ), RNA kink-turns as molecular elbows: Hydration, cation binding, and large-scale dynamics, STRUCTURE 14, 825-835
• Hason, S., Vetterl, V. (2006 ), Amplified oligonucleotide sensing in microliter volumes containing copper ions by solution streaming, ANALYTICAL CHEMISTRY 78, 5179-5183
• Hobza, R., Lengerova, M., Svoboda, J., Kubekova, H., Kejnovsky, E., Vyskot, B. (2006 ), An accumulation of tandem DNA repeats on the Y chromosome in Silene latifolia during early stages of sex chromosome evolution, CHROMOSOMA 115, 376-382
• Ramos-Lima, FJ., Vrana, O., Quiroga, AG., Navarro-Ranninger, CN., Halamikova, A., Rybnickova, H., Hejmalova, L., Brabec, V. (2006 ), Structural characterization, DNA interactions, and cytotoxicity of new transplatin analogues containing one aliphatic and one planar heterocyclic amine ligand, JOURNAL OF MEDICINAL CHEMISTRY 49, 2640-2651
• Heringova, P., Woods, J., Mackay, FS., Kasparkova, J., Sadler, PJ., Brabec, V. (2006 ), Transplatin is cytotoxic when photoactivated: Enhanced formation of DNA cross-links, JOURNAL OF MEDICINAL CHEMISTRY 49, 7792-7798
• Kasparkova, J., Novakova, O., Vrana, O., Intini, F., Natile, G., Brabec, V. (2006 ), Molecular aspects of antitumor effects of a new platinum(IV) drug, MOLECULAR PHARMACOLOGY 70, 1708-1719
• Kiran, NS., Polanska, L., Fohlerova, R., Mazura, P., Valkova, M., Smeral, M., Zouhar, J., Malbeck, J., Dobrev, PI., Machackova, I., Brzobohaty, B. (2006 ), Ectopic over-expression of the maize beta-glucosidase Zm-p60.1 perturbs cytokinin homeostasis in transgenic tobacco, JOURNAL OF EXPERIMENTAL BOTANY 57, 985-996
• Sykorova, E., Rowland, A., Leitch, AR., Fajkus, J. (2006 ), Asparagales telomerases which synthesize the human type of telomeres, PLANT MOLECULAR BIOLOGY 60, 633-646
• Ostatna, V., Palecek, E. (2006 ), Self-assembled monolayers of thiol-end-labeled DNA at mercury electrodes, LANGMUIR 22, 6481-6484
• Karadeniz, H., Gulmez, B., Erdem, A., Jelen, F., Ozsoz, M., Palecek, E. (2006 ), Echinomycin and cobalt-phenanthroline as redox indicators of DNA hybridization at gold electrodes, FRONTIERS IN BIOSCIENCE 11, 1870-1877
• Horvath, V., Blanarova, O., Svihalkova-Sindlerova, L., Soucek, K., Hofmanova, J., Sova, P., Kroutil, A., Fedorocko, P., Kozubik, A. (2006 ), Platinum(IV) complex with adamantylamine overcomes intrinsic resistance to cisplatin in ovarian cancer cells, GYNECOLOGIC ONCOLOGY 102, 32-40
• Taslerova, R., Kozubek, S., Bartova, E., Gajduskova, P., Kodet, R., Kozubek, M. (2006 ), Localization of genetic elements of intact and derivative chromosome 11 and 22 territories in nuclei of Ewing sarcoma cells, JOURNAL OF STRUCTURAL BIOLOGY 155, 493-504
• Vaculova, A., Hofmanova, J., Soucek, K., Kozubik, A. (2006 ), Different modulation of TRAIL-induced apoptosis by inhibition of pro-survival pathways in TRAIL-sensitive and TRAIL-resistant colon cancer cells, FEBS LETTERS 580, 6565-6569
• Sponer, JE., Leszczynski, J., Sponer, J. (2006 ), Mechanism of action of anticancer titanocene derivatives: An insight from quantum chemical calculations, JOURNAL OF PHYSICAL CHEMISTRY B 110, 19632-19636
• Andrysik, Z., Machala, M., Chramostova, K., Hofmanova, J., Kozubik, A., Vodracek, J. (2006 ), Activation of ERK1/2 and p38 kinases by polycyclic aromatic hydrocarbons in rat liver epithelial cells is associated with induction of apoptosis, TOXICOLOGY AND APPLIED PHARMACOLOGY 211, 198-208
• Hobza, R., Hrusakova, P., Safar, J., Bartos, J., Janousek, B., Zluvova, J., Michu, E., Dolezel, J., Vyskot, B. (2006 ), MK17, a specific marker closely linked to the gynoecium suppression region on the Y chromosome in Silene latifolia, THEORETICAL AND APPLIED GENETICS 113, 280-287
• Jansova, E., Koutna, I., Krontorad, P., Svoboda, Z., Krivankova, S., Zaloudik, J., Kozubek, M., Kozubek, S. (2006 ), Comparative transcriptome maps: a new approach to the diagnosis of colorectal carcinoma patients using cDNA microarrays, CLINICAL GENETICS 69, 218-227
• Hason, S., Vetterl, V. (2006 ), Microanalysis of oligodeoxynucleotides by cathodic stripping voltammetry at amalgam-alloy surfaces in the presence of copper ions, TALANTA 69, 572-580
• Ondrej, V., Kozubek, S., Lukasova, E., Falk, M., Matula, P., Matula, P., Kozubek, M. (2006 ), Directional motion of foreign plasmid DNA to nuclear HP1 foci, CHROMOSOME RESEARCH 14, 505-514
• Brabec, V., Stehlikova, KN., Malina, J., Vojtiskova, M., Kasparkova, J. (2006 ), Thermodynamic properties of damaged DNA and its recognition by xeroderma pigmentosum group A protein and replication protein A, ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 446, 1-10
• Pivonkova, H., Pecinka, P., Ceskova, P., Fojta, M. (2006 ), DNA modification with cisplatin affects sequence-specific DNA binding of p53 and p73 proteins in a target site-dependent manner, FEBS JOURNAL 273, 4693-4706
• Chvalova, K., Kasparkova, J., Farrell, N., Brabec, V. (2006 ), Deoxyribonuclease I footprinting reveals different DNA binding modes of bifunctional platinum complexes, FEBS JOURNAL 273, 3467-3478
• Stehlikova, K., Kasparkova, J., Novakova, O., Martinez, A., Moreno, V., Brabec, V. (2006 ), Recognition of DNA modified by trans-[PtCl2NH3(4-hydroxymethylpyridine)] by tumor suppressor protein p53 and character of DNA adducts of this cytotoxic complex, FEBS JOURNAL 273, 301-314
• Fojta, M., Brazdilova, P., Cahova, K., Pecinka, P. (2006 ), A single-surface electrochemical biosensor for the detection of DNA triplet repeat expansion, ELECTROANALYSIS 18, 141-151
• Vorlickova, M., Bednarova, K., Kypr, J. (2006 ), Ethanol is a better inducer of DNA guanine tetraplexes than potassium cations, BIOPOLYMERS 82, 253-260
• Reblova, K., Lankas, F., Razga, F., Krasovska, MV., Koca, J., Sponer, J. (2006 ), Structure, dynamics, and elasticity of free 16S rRNA helix 44 studied by molecular dynamics simulations, BIOPOLYMERS 82, 504-520
• Hofer, M., Pospisil, M., Vacek, A., Hola, J., Znojil, V., Weiterova, L., Streitova, D. (2006 ), Effects of adenosine A(3) receptor agonist on bone marrow granulocytic system in 5-fluorouracil-treated mice, EUROPEAN JOURNAL OF PHARMACOLOGY 538, 163-167
• Kejnovsky, E., Kubat, Z., Macas, J., Hobza, R., Mracek, J., Vyskot, B. (2006 ), Retand: a novel family of gypsy-like retrotransposons harboring an amplified tandem repeat, MOLECULAR GENETICS AND GENOMICS 276, 254-263
• Brazda, V., Jagelska, EB., Fojta, M., Palecek, E. (2006 ), Searching for target sequences by p53 protein is influenced by DNA length, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 341, 470-477
• Fialova, M., Kypr, J., Vorlickova, M. (2006 ), The thrombin binding aptamer GGTTGGTGTGGTTGG forms a bimolecular guanine tetraplex, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 344, 50-54
• Vondracek, J., Soucek, K., Sheard, MA., Chramostova, K., Andrysik, Z., Hofmanova, J., Kozubik, A. (2006 ), Dimethyl sulfoxide potentiates death receptor-mediated apoptosis in the human myeloid leukemia U937 cell line through enhancement of mitochondrial membrane depolarization, LEUKEMIA RESEARCH 30, 81-89
• Ostatna, V., Uslu, B., Dogan, B., Ozkan, S., Palecek, E. (2006 ), Native and denatured bovine serum albumin. D.c. polarography, stripping voltammetry and constant current chronopotentiometry, JOURNAL OF ELECTROANALYTICAL CHEMISTRY 593, 172-178
• Fojt, L., Hason, S. (2006 ), Sensitive determination of oligodeoxynucleotides by anodic adsorptive stripping voltammetry at surface-roughened glassy carbon electrode in the presence of copper, JOURNAL OF ELECTROANALYTICAL CHEMISTRY 586, 136-143
• Heyrovska, R. (2006 ), Dependence of ion-water distances on covalent radii, ionic radii in water and distances of oxygen and hydrogen of water from ion/water boundaries, CHEMICAL PHYSICS LETTERS 429, 600-605
• Heyrovska, R. (2006 ), Dependence of the length of the hydrogen bond on the covalent and cationic radii of hydrogen, and additivity of bonding distances, CHEMICAL PHYSICS LETTERS 432, 348-351
• Kejnovsky, E., Kubat, Z., Hobza, R., Lengerova, M., Sato, S., Tabata, S., Fukui, K., Matsunaga, S., Vyskot, B. (2006 ), Accumulation of chloroplast DNA sequences on the Y chromosome of Silene latifolia, GENETICA 128, 167-175
• Cizova, H., Papezikova, I., Kubala, L., Lojek, A., Ciz, M. (2006 ), Increased antioxidant capacity of serum did not prevent lipid peroxidation in the intermittent ischemia-reperfusion of rat small intestine, DIGESTIVE DISEASES AND SCIENCES 51, 657-661
• Mokros, P., Vrbsky, J., Siroky, J. (2006 ), Identification of chromosomal fusion sites in Arabidopsis mutants using sequential bicolour BAC-FISH, GENOME 49, 1036-1042
• Markova, M., Lengerova, M., Ziuvova, J., Janousek, B., Vyskot, B. (2006 ), Karyological analysis of an interspecific hybrid between the dioecious Silene latifolia and the hermaphroditic Silene viscosa, GENOME 49, 373-379
• Fulnecek, J., Matyasek, R., Kovarik, A. (2006 ), Plant 5S rDNA has multiple alternative nucleosome positions, GENOME 49, 840-850
• Hofer, M., Vacek, A., Pospisil, M., Weiterova, L., Hola, J., Streitova, D., Znojil, V. (2006 ), Adenosine potentiates stimulatory effects on granulocyte-macrophage hematopoietic progenitor cells in vitro of IL-3 and SCF, but not those of G- CSF, GM-CSF and IL-11, PHYSIOLOGICAL RESEARCH 55, 591-596
• Pavelkova, M., Kubala, L., Ciz, M., Pavlik, P., Wagner, R., Slavik, J., Ondrasek, J., Cerny, J., Lojek, A. (2006 ), Blood phagocyte activation during open heart surgery with cardiopulmonary bypass, PHYSIOLOGICAL RESEARCH 55, 165-173
• Papezikova, I., Lojek, A., Cizova, H., Ciz, M. (2006 ), Alterations in plasma antioxidants during reperfusion of the ischemic small intestine in rats, RESEARCH IN VETERINARY SCIENCE 81, 140-147
• Komrskova, D., Lojek, A., Hrbac, J., Ciz, M. (2006 ), A comparison of chemical systems for luminometric determination of antioxidant capacity towards individual reactive oxygen species, LUMINESCENCE 21, 239-244
• Falk, M., Vojtiskova, M., Lukas, Z., Kroupova, I., Froster, U. (2006 ), Simple procedure for automatic detection of unstable alleles in the myotonic dystrophy and Huntington's disease loci, GENETIC TESTING 10, 85-97
• Hofer, M., Pospisil, M. (2006 ), Stimulated recovery of perturbed haematopoiesis by inhibition of prostaglandin production - promising therapeutic strategy, CENTRAL EUROPEAN JOURNAL OF BIOLOGY 1, 584-593
• Hofer, M., Vacek, A., Hola, J., Weiterova, L., Streitova, D. (2006 ), Peroral IMUNOR (R), a low-molecular-weight immunomodulator prepared from disintegrated and ultrafiltered leukocytes, enhances recovery from myelosuppression induced by cisplatin or 5-fluorouracil, IMMUNOPHARMACOLOGY AND IMMUNOTOXICOLOGY 28, 1-11
• Brabec, V., Novakova, O. (2006 ), DNA binding mode of ruthenium complexes and relationship to tumor cell toxicity, DRUG RESISTANCE UPDATES 9, 111-122
• Spackova, N., Sponer, J. (2006 ), Molecular dynamics simulations of sarcin-ricin rRNA motif, NUCLEIC ACIDS RESEARCH 34, 697-708
• Sponer, J., Jurecka, P., Marchan, I., Luque, FJ., Orozco, M., Hobza, P. (2006 ), Nature of base stacking: Reference quantum-chemical stacking energies in ten unique B-DNA base-pair steps, CHEMISTRY-A EUROPEAN JOURNAL 12, 2854-2865
• Krasovska, MV., Sefcikova, J., Reblova, K., Schneider, B., Walter, NG., Sponer, J. (2006 ), Cations and hydration in catalytic RNA: Molecular dynamics of the hepatitis delta virus ribozyme, BIOPHYSICAL JOURNAL 91, 626-638
• Bartova, E., Kozubek, S. (2006 ), Nuclear architecture in the light of gene expression and cell differentiation studies, BIOLOGY OF THE CELL 98, 323-336
• Fojta, M., Fojtova, M., Havran, L., Pivonkova, H., Dorcak, V., Sestakova, I. (2006 ), Electrochemical monitoring of phytochelatin accumulation in Nicotiana tabacum cells exposed to sub-cytotoxic and cytotoxic levels of cadmium, ANALYTICA CHIMICA ACTA 558, 171-178
• Harnicarova, A., Kozubek, S., Pachernik, J., Krejci, J., Bartova, E. (2006 ), Distinct nuclear arrangement of active and inactive c-myc genes in control and differentiated colon carcinoma cells, EXPERIMENTAL CELL RESEARCH 312, 4019-4035
• Hofer, M., Pospisil, M., Znojil, V., Hola, J., Vacek, A., Weiterova, L., Streitova, D., Kozubik, A. (2006 ), Meloxicam, a cyclooxygenase 2 inhibitor, supports hematopoietic recovery in gamma-irradiated mice, RADIATION RESEARCH 166, 556-560
• Pivonkova, H., Brazdova, M., Kasparkova, J., Brabec, V., Fojta, M. (2006 ), Recognition of cisplatin-damaged DNA by p53 protein: Critical role of the p53 C-terminal domain, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 339, 477-484
• Soucek, K., Pachernik, J., Kubala, L., Vondracek, J., Hofmanova, J., Kozubik, A. (2006 ), Transforming growth factor-beta 1 inhibits all-trans retinoic acid-induced apoptosis, LEUKEMIA RESEARCH 30, 607-623

2005

• Marini, V., Christofis, P., Novakova, O., Kasparkova, J., Farrell, N., Brabec, V. (2005 ), Conformation, protein recognition and repair of DNA interstrand and intrastrand cross-links of antitumor trans-[PtCl2(NH3)(thiazole)], NUCLEIC ACIDS RESEARCH 33, 5819-5828
• Nejedly, K., Chladkova, J., Vorlickova, M., Hrabcova, I., Kypr, J. (2005 ), Mapping the B-A conformational transition along plasmid DNA, NUCLEIC ACIDS RESEARCH 33
• Watson, JM., Bulankova, P., Riha, K., Shippen, DE., Vyskot, B. (2005 ), Telomerase-independent cell survival in Arabidopsis thaliana, PLANT JOURNAL 43, 662-674
• Koukalova, B., Fojtova, M., Lim, KY., Fulnecek, J., Leitch, AR., Kovarik, A. (2005 ), Dedifferentiation of tobacco cells is associated with ribosomal RNA gene hypomethylation, increased transcription, and chromatin alterations, PLANT PHYSIOLOGY 139, 275-286
• Cahova-Kucharikova, K., Fojta, M., Mozga, T., Palecek, E. (2005 ), Use of DNA repair enzymes in electrochemical detection of damage to DNA bases in vitro and in cells, ANALYTICAL CHEMISTRY 77, 2920-2927
• Vondracek, J., Machala, M., Bryja, V., Chramostova, K., Krcmar, P., Dietrich, C., Hampl, A., Kozubik, A. (2005 ), Aryl hydrocarbon receptor-activating polychlorinated biphenyls and their hydroxylated metabolites induce cell proliferation in contact-inhibited rat liver epithelial cells, TOXICOLOGICAL SCIENCES 83, 53-63
• Pliskova, M., Vondracek, J., Vojtesek, B., Kozubik, A., Machala, M. (2005 ), Deregulation of cell proliferation by polycyclic aromatic hydrocarbons in human breast carcinoma MCF-7 cells reflects both genotoxic and nongenotoxic events, TOXICOLOGICAL SCIENCES 83, 246-256
• Lukasova, E., Koristek, Z., Falk, M., Kozubek, S., Grigoryev, S., Kozubek, M., Ondrej, V., Kroupova, I. (2005 ), Methylation of histones in myeloid leukemias as a potential marker of granulocyte abnormalities, JOURNAL OF LEUKOCYTE BIOLOGY 77, 100-111
• Delalande, O., Malina, J., Brabec, V., Kozelka, J. (2005 ), Chiral differentiation of DNA adducts formed by enantiomeric analogues of antitumor cisplatin is sequence-dependent, BIOPHYSICAL JOURNAL 88, 4159-4169
• Bursova, V., Kasparkova, J., Hofr, C., Brabec, V. (2005 ), Effects of monofunctional adducts of Platinum(II) complexes on thermodynamic stability and energetics of DNA duplexes, BIOPHYSICAL JOURNAL 88, 1207-1214
• Kozubik, A., Horvath, V., Svihalkova-Sindlerova, L., Soucek, K., Hofmanova, J., Sova, P., Kroutil, A., Zak, F., Mistr, A., Turanek, J. (2005 ), High effectiveness of platinum(IV) complex with adamantylamine in overcoming resistance to cisplatin and suppressing proliferation of ovarian cancer cells in vitro, BIOCHEMICAL PHARMACOLOGY 69, 373-383
• Zluvova, J., Janousek, B., Negrutiu, I., Vyskot, B. (2005 ), Comparison of the X and Y chromosome organization in Silene latifolia, GENETICS 170, 1431-1434
• Jaouen, S., de Koning, L., Gaillard, C., Muselikova-Polanska, E., Stros, M., Strauss, F. (2005 ), Determinants of specific binding of HMGB1 protein to hemicatenated DNA loops, JOURNAL OF MOLECULAR BIOLOGY 353, 822-837
• Hofmanova, J., Vaculova, A., Kozubik, A. (2005 ), Polyunsaturated fatty acids sensitize human colon adenocarcinoma HT-29 cells to death receptor-mediated apoptosis, CANCER LETTERS 218, 33-41
• Vaculova, A., Hofmanova, J., Andera, L., Kozubik, A. (2005 ), TRAIL and docosahexaenoic acid cooperate to induce HT-29 colon cancer cell death, CANCER LETTERS 229, 43-48
• Sponer, JE., Spackova, N., Leszczynski, J., Sponer, J. (2005 ), Principles of RNA base pairing: Structures and energies of the trans Watson-Crick/sugar edge base pairs, JOURNAL OF PHYSICAL CHEMISTRY B 109, 11399-11410
• Sponer, JE., Leszczynski, J., Sychrovsky, V., Sponer, J. (2005 ), Sugar edge/sugar edge base pairs in RNA: Stabilities and structures from quantum chemical calculations, JOURNAL OF PHYSICAL CHEMISTRY B 109, 18680-18689
• Najajreh, Y., Kasparkova, J., Marini, V., Gibson, D., Brabec, V. (2005 ), Structural characterization and DNA interactions of new cytotoxic transplatin analogues containing one planar and one nonplanar heterocyclic amine ligand, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 10, 722-731
• Zluvova, J., Lengerova, M., Markova, M., Hobza, R., Nicolas, M., Vyskot, B., Charlesworth, D., Negrutiu, I., Janousek, B. (2005 ), The inter-specific hybrid Silene latifolia x S-viscosa reveals early events of sex chromosome evolution, EVOLUTION & DEVELOPMENT 7, 327-336
• Sponer, JE., Spackova, N., Kulhanek, P., Leszczynski, J., Sponer, J. (2005 ), Non-Watson-Crick base pairing in RNA. Quantum chemical analysis of the cis Watson-Crick/sugar edge base pair family, JOURNAL OF PHYSICAL CHEMISTRY A 109, 2292-2301
• Ostatna, V., Jelen, F., Hianik, T., Palecek, E. (2005 ), Electrochemical responses of thiolated oligodeoxynucleotides in cobalt-containing solutions, ELECTROANALYSIS 17, 1413-1420
• Fadrna, R., Cahova-Kucharikova, K., Havran, L., Yosypchuk, B., Fojta, M. (2005 ), Use of polished and mercury film-modified silver solid amalgam electrodes in electrochemical analysis of DNA, ELECTROANALYSIS 17, 452-459
• Hofr, C., Brabec, V. (2005 ), Thermal stability and energetics of 15-mer DNA duplex interstrand crosslinked by trans-diamminedichloroplatinum(II), BIOPOLYMERS 77, 222-229
• Pospisil, M., Hofer, M., Vacek, A., Hola, J., Pipalova, I., Znojil, V. (2005 ), N-6-Cyclopentyladenosinc haematopoietic inhibits proliferation of murine progenitor cells in vivo, EUROPEAN JOURNAL OF PHARMACOLOGY 507, 1-6
• Hanzalek, P., Kypr, J. (2005 ), DNA in phosphorus atom representation: the heteronomous double helices of poly(dA)center dot poly(dT) and poly(dG)center dot poly(dC) and simulation of the yeast genome and of a human chromosome DNA, JOURNAL OF THEORETICAL BIOLOGY 232, 83-91
• Fajkus, J., Sykorova, E., Leitch, AR. (2005 ), Techniques in plant telomere biology, BIOTECHNIQUES 38, 233-243
• Zemanek, M., Kypr, J., Vorlickova, M. (2005 ), Conformational properties of DNA containing (CCA)(n) and (TGG)(n) trinucleotide repeats, INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES 36, 23-32
• Hason, S., Jelen, F., Fojt, L., Vetterl, V. (2005 ), Determination of picogram quantities of oligodeoxynucleotides by stripping voltammetry at mercury modified graphite electrode surfaces, JOURNAL OF ELECTROANALYTICAL CHEMISTRY 577, 263-272
• Neplechova, K., Sykorova, E., Fajkus, J. (2005 ), Comparison of different kinds of probes used for analysis of variant telomeric sequences, BIOPHYSICAL CHEMISTRY 117, 225-231
• Cherny, DI., Brazdova, M., Palecek, J., Palecek, E., Jovin, TM. (2005 ), Sequestering of p53 into DNA-protein filaments revealed by electron microscopy, BIOPHYSICAL CHEMISTRY 114, 261-271
• Hofer, M., Vacek, A., Weiterova, L. (2005 ), Action of granulopoiesis-stimulating cytokines rhG-CSF, rhGM-CSF, and rmGM-CSF on murine hematopoietic progenitor cells for granulocytes and macrophages (GM-CFC), PHYSIOLOGICAL RESEARCH 54, 207-213
• Hofmanova, J., Zadak, Z., Hyspler, R., Mikeska, J., Zdansky, P., Vaculova, A., Netikova, J., Kozubik, A. (2005 ), The effects of parenteral lipid emulsions on cancer and normal human colon epithelial cells in vitro, PHYSIOLOGICAL RESEARCH 54, 409-418
• Kourilova, A., Babkina, S., Cahova, K., Havran, L., Jelen, F., Palecek, E., Fojta, M. (2005 ), DNA hybridization on membrane-modified carbon electrodes, ANALYTICAL LETTERS 38, 2493-2507
• Vacek, A., Hofer, M., Schneiderova, H., Svoboda, J. (2005 ), Ultrafiltered pig leukocyte extract (UPLE, IMUNOR (R)) potentiates hematopoiesis-stimulating effects of G-CSF in vitro and improves the outcome of treatment of hematopoietic radiation damage in mice with G-CSF, IMMUNOPHARMACOLOGY AND IMMUNOTOXICOLOGY 27, 647-659
• Brabec, V., Kasparkova, J. (2005 ), Modifications of DNA by platinum complexes - Relation to resistance of tumors to platinum antitumor drugs, DRUG RESISTANCE UPDATES 8, 131-146
• Vorlickova, M., Chladkova, J., Kejnovska, I., Fialova, M., Kypr, J. (2005 ), Guanine tetraplex topology of human telomere DNA is governed by the number of (TTAGGG) repeats, NUCLEIC ACIDS RESEARCH 33, 5851-5860
• Bartova, E., Pachernik, J., Harnicarova, A., Kovarik, A., Kovarikova, M., Hofmanova, J., Skalnikova, M., Kozubek, M., Kozubek, S. (2005 ), Nuclear levels and patterns of histone H3 modification and HP1 proteins after inhibition of histone deacetylases, JOURNAL OF CELL SCIENCE 118, 5035-5046
• Skalicka, K., Lim, KY., Matyasek, R., Matzke, M., Leitch, AR., Kovarik, A. (2005 ), Preferential elimination of repeated DNA sequences from the paternal, Nicotiana tomentosiformis genome donor of a synthetic, allotetraploid tobacco, NEW PHYTOLOGIST 166, 291-303
• Razga, F., Koca, J., Sponer, J., Leontis, NB. (2005 ), Hinge-like motions in RNA kink-turns: The role of the second A-minor motif and nominally unpaired bases, BIOPHYSICAL JOURNAL 88, 3466-3485
• Hofmanova, J., Vaculova, A., Lojek, A., Kozubik, A. (2005 ), Interaction of polyunsaturated fatty acids and sodium butyrate during apoptosis in HT-29 human colon adenocarcinoma cells, EUROPEAN JOURNAL OF NUTRITION 44, 40-51
• Kovarik, A., Pires, JC., Leitch, AR., Lim, KY., Sherwood, AM., Matyasek, R., Rocca, J., Soltis, DE., Soltis, PS. (2005 ), Rapid concerted evolution of nuclear ribosomal DNA in two tragopogon allopolyploids of recent and recurrent origin, GENETICS 169, 931-944
• Bartova, E., Harnicarova, A., Pachernik, J., Kozubek, S. (2005 ), Nuclear topography and expression of the BCR/ABL fusion gene and its protein level influenced by cell differentiation and RNA interference, LEUKEMIA RESEARCH 29, 901-913

2004

• Sponer, JE., Miguel, PJS., Rodriguez-Santiago, L., Erxleben, A., Krumm, M., Sodupe, M., Sponer, J., Lippert, B. (2004 ), Metal-mediated deamination of cytosine: Experiment and DFT calculations, ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 43, 5396-5399
• Spackova, N., Cubero, E., Sponer, J., Orozco, M. (2004 ), Theoretical study of the guanine -> 6-thioguanine substitution in duplexes, triplexes, and tetraplexes, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 126, 14642-14650
• Fojtik, P., Kejnovska, I., Vorlickova, M. (2004 ), The guanine-rich fragile X chromosome repeats are reluctant to form tetraplexes, NUCLEIC ACIDS RESEARCH 32, 298-306
• Palecek, E., Brazda, V., Jagelska, E., Pecinka, P., Karlovska, L., Brazdova, M. (2004 ), Enhancement of p53 sequence-specific binding by DNA supercoiling, ONCOGENE 23, 2119-2127
• Palecek, E. (2004 ), Surface-attached molecular beacons light the way for DNA sequencing, TRENDS IN BIOTECHNOLOGY 22, 55-58
• Fojta, M., Havran, L., Kizek, R., Billova, S., Palecek, E. (2004 ), Multiply osmium-labeled reporter probes for electrochemical DNA hybridization assays: detection of trinucleotide repeats, BIOSENSORS & BIOELECTRONICS 20, 985-994
• Lukasova, E., Kozubek, S., Falk, M., Kozubek, M., Zaloudik, J., Vagunda, V., Pavlovsky, Z. (2004 ), Topography of genetic loci in the nuclei of cells of colorectal carcinoma and adjacent tissue of colonic epithelium, CHROMOSOMA 112, 221-230
• Prokop, R., Kasparkova, J., Novakova, O., Marini, V., Pizarro, AM., Navarro-Ranninger, C., Brabec, V. (2004 ), DNA interactions of new antitumor platinum complexes with trans geometry activated by a 2-metylbutylamine or sec-butylamine ligand, BIOCHEMICAL PHARMACOLOGY 67, 1097-1109
• Lim, KY., Skalicka, K., Koukalova, B., Volkov, RA., Matyasek, R., Hemleben, V., Leitch, AR., Kovarik, A. (2004 ), Dynamic changes in the distribution of a satellite homologous to intergenic 26-18S rDNA spacer in the evolution of Nicotiana, GENETICS 166, 1935-1946
• Vaculova, A., Hofmanova, J., Soucek, K., Andera, L., Kozubik, A. (2004 ), Ethanol acts as a potent agent sensitizing colon cancer cells to the TRAIL-induced apoptosis, FEBS LETTERS 577, 309-313
• Lengerova, M., Kejnovsky, E., Hobza, R., Macas, J., Grant, SR., Vyskot, B. (2004 ), Multicolor FISH mapping of the dioecious model plant, Silene latifolia, THEORETICAL AND APPLIED GENETICS 108, 1193-1199
• Chramostova, K., Vondracek, J., Sindlerova, L., Vojtesek, B., Kozubik, A., Machala, M. (2004 ), Polycyclic aromatic hydrocarbons modulate cell proliferation in rat hepatic epithelial stem-like WB-F344 cells, TOXICOLOGY AND APPLIED PHARMACOLOGY 196, 136-148
• Kovarikova, M., Hofmanova, J., Soucek, K., Kozubik, A. (2004 ), The effects of TNF-alpha and inhibitors of arachidonic acid metabolism on human colon HT-29 cells depend on differentiation status, DIFFERENTIATION 72, 23-31
• Hobza, R., Lengerova, M., Cernohorska, H., Rubes, J., Vyskot, B. (2004 ), FAST-FISH with laser beam microdissected DOP-PCR probe distinguishes the sex chromosomes of Silene latifolia, CHROMOSOME RESEARCH 12, 245-250
• Stros, M., Muselikova-Polanska, E., Pospisilova, S., Strauss, F. (2004 ), High-affinity binding of tumor-suppressor protein p53 and HMGB1 to hemicatenated DNA loops, BIOCHEMISTRY 43, 7215-7225
• Fojta, M., Pivonkova, H., Brazdova, M., Nemcova, K., Palecek, J., Vojtesek, B. (2004 ), Investigations of the supercoil-selective DNA binding of wild type p53 suggest a novel mechanism for controlling p53 function, EUROPEAN JOURNAL OF BIOCHEMISTRY 271, 3865-3876
• Galiova, G., Bartova, E., Kozubek, S. (2004 ), Nuclear topography of beta-like globin gene cluster in IL-3-stimulated human leukemic K-562 cells, BLOOD CELLS MOLECULES AND DISEASES 33, 4-14
• Kucharikova, K., Novotny, L., Yosypchuk, B., Fojta, M. (2004 ), Detecting DNA damage with a silver solid amalgam electrode, ELECTROANALYSIS 16, 410-414
• Havran, L., Billova, S., Palecek, E. (2004 ), Electroactivity of avidin and streptavidin. Avidin signals at mercury and carbon electrodes respond to biotin binding, ELECTROANALYSIS 16, 1139-1148
• Masarik, M., Stobiecka, A., Kizek, R., Jelen, F., Pechan, Z., Hoyer, W., Jovin, TM., Subramaniam, V., Palecek, E. (2004 ), Sensitive electrochemical detection of native and aggregated alpha-synuclein protein involved in Parkinson's disease, ELECTROANALYSIS 16, 1172-1181
• Hason, S., Simonaho, SP., Silvennoinen, R., Vetterl, V. (2004 ), Detection of phase transients in two-dimensional adlayers of adenosine at the solid amalgam electrode surfaces, JOURNAL OF ELECTROANALYTICAL CHEMISTRY 568, 65-77
• Schrumpfova, P., Kuchar, M., Mikova, G., Skrisovska, L., Kubicarova, T., Fajkus, J. (2004 ), Characterization of two Arabidopsis thaliana myb-like proteins showing affinity to telomeric DNA sequence, GENOME 47, 316-324
• Pospisil, M., Hofer, M., Vacek, A., Znojil, V., Pipalova, I. (2004 ), Effects of stable adenosine receptor agonists on bone marrow hematopoietic cells as inferred from the cytotoxic action of 5-fluorouracil, PHYSIOLOGICAL RESEARCH 53, 549-556
• Gallova, L., Kubala, L., Ciz, M., Lojek, A. (2004 ), IL-10 does not affect oxidative burst and expression of selected surface antigen on human blood phagocytes in vitro, PHYSIOLOGICAL RESEARCH 53, 199-208
• Cizova, H., Lojek, A., Kubala, L., Ciz, M. (2004 ), The effect of intestinal ischemia duration on changes in plasma antioxidant defense status in rats, PHYSIOLOGICAL RESEARCH 53, 523-531
• Hyrsl, P., Lojek, A., Ciz, M., Kubala, L. (2004 ), Chemiluminescence of lucigenin is dependent on experimental conditions, LUMINESCENCE 19, 61-63
• Pavelkova, M., Kubala, L. (2004 ), Luminol-, isoluminol- and lucigenin-enhanced chemiluminescence of rat blood phagocytes stimulated with different activators, LUMINESCENCE 19, 37-42
• Malaska, J., Kunicka, Z., Borsky, M., Sklenickova, M., Novotna, M., Fajkusova, L., Zaloudik, J., Fajkus, J. (2004 ), Telomerase as a diagnostic and predictive marker in colorectal carcinoma, NEOPLASMA 51, 90-96
• Razga, F., Spackova, N., Reblova, K., Koca, J., Leontis, NB., Sponer, J. (2004 ), Ribosomal RNA kink-turn motif - A flexible molecular hinge, JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 22, 183-193
• Hyrsl, P., Ciz, M., Lojek, A. (2004 ), Comparison of the bioluminescence of Photorhabdus species and subspecies type strains, FOLIA MICROBIOLOGICA 49, 539-542
• Fojta, M. (2004 ), Mercury electrodes in nucleic acid electrochemistry: Sensitive analytical tools and probes of DNA structure. A review, COLLECTION OF CZECHOSLOVAK CHEMICAL COMMUNICATIONS 69, 715-747
• Vyskot, B., Hobza, R. (2004 ), Gender in plants: sex chromosomes are emerging from the fog, TRENDS IN GENETICS 20, 432-438
• Sponer, J., Jurecka, P., Hobza, P. (2004 ), Accurate interaction energies of hydrogen-bonded nucleic acid base pairs, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 126, 10142-10151
• Fojta, M., Havran, L., Vojtiskova, M., Palecek, E. (2004 ), Electrochemical detection of DNA triplet repeat expansion, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 126, 6532-6533
• Kasparkova, J., Fojta, M., Farrell, N., Brabec, V. (2004 ), Differential recognition by the tumor suppressor protein p53 of DNA modified by the novel antitumor trinuclear platinum drug BBR3464 and cisplatin, NUCLEIC ACIDS RESEARCH 32, 5546-5552
• Palecek, E., Masarik, M., Kizek, R., Kuhlmeier, D., Hassmann, J., Schulein, J. (2004 ), Sensitive electrochemical determination of unlabeled MutS protein and detection of point mutations in DNA, ANALYTICAL CHEMISTRY 76, 5930-5936
• Fadrna, E., Spackova, N., Stefl, R., Koca, J., Cheatham, TE., Sponer, J. (2004 ), Molecular dynamics simulations of guanine quadruplex loops: Advances and force field limitations, BIOPHYSICAL JOURNAL 87, 227-242
• Sponer, JE., Sychrovsky, V., Hobza, P., Sponer, J. (2004 ), Interactions of hydrated divalent metal cations with nucleic acid bases. How to relate the gas phase data to solution situation and binding selectivity in nucleic acids, PHYSICAL CHEMISTRY CHEMICAL PHYSICS 6, 2772-2780
• Vacek, J., Andrysik, Z., Trnkova, L., Kizek, R. (2004 ), Determination of azidothymidine - an antiproliferative and virostatic drug by square-wave voltammetry, ELECTROANALYSIS 16, 224-230
• Kejnovsky, E., Nejedly, K., Kypr, J. (2004 ), Factors influencing resistance of UV-irradiated DNA to the restriction endonuclease cleavage, INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES 34, 213-222
• Hoferova, Z., Soucek, K., Hofmanova, J., Hofer, M., Chramostova, K., Fedorocko, P., Kozubik, A. (2004 ), In vitro proliferation of fibrosarcoma cells depends on intact functions of lipoxygenases and cytochrome P-450-monooxygenase, CANCER INVESTIGATION 22, 234-247
• Kovarik A, Matyasek R, Lim KY, Skalicka K, Koukalova B, Knapp S, Chase M, Leitch AR (2004 ), Concerted evolution of 18-5.8-26S rDNA repeats in Nicotiana allotetraploids, BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

2003

• Chen, HM., Parkinson, JA., Novakova, O., Bella, J., Wang, FY., Dawson, A., Gould, R., Parsons, S., Brabec, V., Sadler, PJ. (2003 ), Induced-fit recognition of DNA by organometallic complexes with dynamic stereogenic centers, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100, 14623-14628
• Fojtova, M., Van Houdt, H., Depicker, A., Kovarik, A. (2003 ), Epigenetic switch from posttranscriptional to transcriptional silencing is correlated with promoter hypermethylation, PLANT PHYSIOLOGY 133, 1240-1250
• Masarik, M., Kizek, R., Kramer, KJ., Billova, S., Brazdova, M., Vacek, J., Bailey, M., Jelen, F., Howard, JA. (2003 ), Application of avidin-biotin technology and adsorptive transfer stripping square-wave voltammetry for detection of DNA hybridization and avidin in transgenic avidin maize, ANALYTICAL CHEMISTRY 75, 2663-2669
• Siroky, J., Zluvova, J., Riha, K., Shippen, DE., Vyskot, B. (2003 ), Rearrangements of ribosomal DNA clusters in late generation telomerase-deficient Arabidopsis, CHROMOSOMA 112, 116-123
• Taslerova, R., Kozubek, S., Lukasova, E., Jirsova, P., Bartova, E., Kozubek, M. (2003 ), Arrangement of chromosome 11 and 22 territories, EWSR1 and FLI1 genes, and other genetic elements of these chromosomes in human lymphocytes and Ewing sarcoma cells, HUMAN GENETICS 112, 143-155
• Lengerova, M., Moore, RC., Grant, SR., Vyskot, B. (2003 ), The sex chromosomes of Silene latifolia revisited and revised, GENETICS 165, 935-938
• Sponer, J., Mokdad, A., Sponer, JE., Spackova, N., Leszczynski, J., Leontis, NB. (2003 ), Unique tertiary and neighbor interactions determine conservation patterns of Cis Watson-Crick A/G base-pairs, JOURNAL OF MOLECULAR BIOLOGY 330, 967-978
• Kasparkova, J., Novakova, O., Najajreh, Y., Gibson, D., Perez, JM., Brabec, V. (2003 ), Effects of a piperidine ligand on DNA modification by antitumor cisplatin analogues, CHEMICAL RESEARCH IN TOXICOLOGY 16, 1424-1432
• Amrichova, J., Lukasova, E., Kozubek, S., Kozubek, M. (2003 ), Nuclear and territorial topography of chromosome telomeres in human lymphocytes, EXPERIMENTAL CELL RESEARCH 289, 11-26
• Kejnovska, I., Kypr, J., Vorlickova, M. (2003 ), Circular dichroism spectroscopy of conformers of (guanine plus adenine) repeat strands of DNA, CHIRALITY 15, 584-592
• Sykorova, E., Cartagena, J., Horakova, M., Fukui, K., Fajkus, J. (2003 ), Characterization of telomere-subtelomere junctions in Silene latifolia, MOLECULAR GENETICS AND GENOMICS 269, 13-20
• Hejatko, J., Pernisova, M., Eneva, T., Palme, K., Brzobohaty, B. (2003 ), The putative sensor histidine kinase CKI1 is involved in female gametophyte development in Arabidopsis, MOLECULAR GENETICS AND GENOMICS 269, 443-453
• Fajkus, J., Koppova, K., Kunicka, Z. (2003 ), Dual-color real-time telomeric repeat amplification protocol, BIOTECHNIQUES 35, 912-914
• Hrabcova, I., Kypr, J. (2003 ), Genomic occurrence of microsatellites containing integral and non-integral repeat numbers, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 300, 824-831
• Kypr, J., Kejnovska, I., Vorlickova, M. (2003 ), DNA homoduplexes containing no pyrimidine nucleotide, EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 32, 154-158
• Hofer, M., Weiterova, L., Vacek, A., Znojil, V., Pospisil, M., Vacha, J. (2003 ), Elevation of extracellular adenosine mobilizes haematopoietic progenitor cells and granulocytes into peripheral blood and enhances the mobilizing effects of granulocyte colony-stimulating factor, EUROPEAN JOURNAL OF HAEMATOLOGY 71, 204-210
• Drazan, V., Retter, U. (2003 ), On the kinetics of xanthine adsorption at the mercury vertical bar electrolyte interface, JOURNAL OF ELECTROANALYTICAL CHEMISTRY 548, 79-84
• Bartova, E., Kozubek, S., Gajova, H., Jirsova, P., Zluvova, J., Taslerova, R., Koutna, I., Kozubek, M. (2003 ), Cytogenetics and cytology of retinoblastomas, JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY 129, 89-99
• Reichova, N., Kypr, J. (2003 ), Expansion during PCR of short single-stranded DNA fragments carrying nonselfcomplementary dinucleotide or trinucleotide repeats, MOLECULAR BIOLOGY REPORTS 30, 155-163
• Kubala, L., Ruzickova, J., Nickova, K., Sandula, J., Ciz, M., Lojek, A. (2003 ), The effect of (1 -> 3)-beta-D-glucans carboxymethylglucan and schizophyllan on human leukocytes in vitro, CARBOHYDRATE RESEARCH 338, 2835-2840
• Hodurkova, J., Vyskot, B. (2003 ), Histone H4 acetylation patterns during seed germination and early plant development, BIOLOGIA PLANTARUM 46, 23-28
• Hofer, M., Hoferova, Z., Pospisil, M., Znojil, V., Chramostova, K. (2003 ), Effects of adenosine on the growth of murine G : 5 : 113 fibrosarcoma cells in vitro, FOLIA BIOLOGICA 49, 207-210
• Hoferova, Z., Hofer, M., Pospisil, M., Znojil, V., Chramostova, K. (2003 ), Effects of synthetic adenosine receptor agonists on growth characteristics of G : 5 : 113 fibrosarcoma cells in vitro, DRUG DEVELOPMENT RESEARCH 60, 303-311
• Novakova, O., Kasparkova, J., Malina, J., Natile, G., Brabec, V. (2003 ), DNA-protein cross-linking by trans-[PtCl2(E-iminoether)(2)]. A concept for activation of the trans geometry in platinum antitumor complexes, NUCLEIC ACIDS RESEARCH 31, 6450-6460
• Bartova, E., Jirsova, P., Fojtova, M., Soucek, K., Kozubek, S. (2003 ), Chromosomal territory segmentation in apoptotic cells, CELLULAR AND MOLECULAR LIFE SCIENCES 60, 979-990
• Kasparkova, J., Novakova, O., Marini, V., Najajreh, Y., Gibson, D., Perez, JM., Brabec, V. (2003 ), Activation of trans geometry in bifunctional mononuclear platinum complexes by a piperidine ligand - Mechanistic studies on antitumor action, JOURNAL OF BIOLOGICAL CHEMISTRY 278, 47516-47525
• Reblova, K., Spackova, N., Stefl, R., Csaszar, K., Koca, J., Leontis, NB., Sponer, J. (2003 ), Non-Watson-Crick basepairing and hydration in RNA motifs: Molecular dynamics of 5S rRNA loop E, BIOPHYSICAL JOURNAL 84, 3564-3582
• Fojta, M., Pivonkova, H., Brazdova, M., Kovarova, L., Palecek, E., Pospisilova, S., Vojtesek, B., Kasparkova, J., Brabec, V. (2003 ), Recognition of DNA modified by antitumor cisplatin by "latent" and "active" protein p53, BIOCHEMICAL PHARMACOLOGY 65, 1305-1316
• Kasparkova, J., Marini, V., Najajreh, Y., Gibson, D., Brabec, V. (2003 ), DNA binding mode of the cis and trans geometries of new antitumor nonclassical platinum complexes containing piperidine, piperazine, or 4-picoline ligand in cell-free media. Relations to their activity in cancer cell lines, BIOCHEMISTRY 42, 6321-6332
• Kasparkova, J., Delalande, O., Stros, M., Elizondo-Riojas, MA., Vojtiskova, M., Kozelka, J., Brabec, V. (2003 ), Recognition of DNA interstrand cross-link of antitumor cisplatin by HMGB1 protein, BIOCHEMISTRY 42, 1234-1244
• Skalicka, K., Lim, KY., Matyasek, R., Koukalova, B., Leitch, AR., Kovarik, A. (2003 ), Rapid evolution of parental rDNA in a synthetic tobacco allotetraploid line, AMERICAN JOURNAL OF BOTANY 90, 988-996
• Hoferova, Z., Vacek, A., Hofer, M., Mackova, NO., Soucek, K., Egyed, A., Fedorocko, P. (2003 ), Tumor-host interactions accompanying the growth of the G : 5 : 113 fibrosarcoma in the mouse: Possibilities for a new therapeutic approach?, CANCER INVESTIGATION 21, 227-236
• Fajkus, J., Borsky, M., Kunicka, Z., Kovarikova, M., Dvorakova, D., Hofmanova, J., Kozubik, A. (2003 ), Changes in telomerase activity, expression and splicing in response to differentiation of normal and carcinoma colon cells, ANTICANCER RESEARCH 23, 1605-1612
• Hoferova, Z., Fedorocko, P., Hofer, M., Hofmanova, J., Kozubik, A., Eliasova, V. (2003 ), Lipoxygenase inhibitors suppress proliferation of G5 : 113 fibrosarcoma cells in vitro but they have no anticancer activity in vivo, NEOPLASMA 50, 102-109
• Sponer, J., Hobza, P. (2003 ), Molecular interactions of nucleic acid bases. A review of quantum-chemical studies, COLLECTION OF CZECHOSLOVAK CHEMICAL COMMUNICATIONS 68, 2231-2282

2002

• Stehlikova, K., Kostrhunova, H., Kasparkova, J., Brabec, V. (2002 ), DNA bending and unwinding due to the major 1,2-GG intrastrand cross-link formed by antitumor cis-diamminedichloroplatinum(II) are flanking-base independent, NUCLEIC ACIDS RESEARCH 30, 2894-2898
• Brazdova, M., Palecek, J., Cherny, DI., Billova, S., Fojta, M., Pecinka, P., Vojtesek, B., Jovin, TM., Palecek, E. (2002 ), Role of tumor suppressor p53 domains in selective binding to supercoiled DNA, NUCLEIC ACIDS RESEARCH 30, 4966-4974
• Malina, J., Kasparkova, J., Natile, G., Brabec, V. (2002 ), Recognition of major DNA adducts of enantiomeric cisplatin analogs by HMG box proteins and nucleotide excision repair of these adducts, CHEMISTRY & BIOLOGY 9, 629-638
• Vondracek, J., Kozubik, A., Machala, M. (2002 ), Modulation of estrogen receptor-dependent reporter construct activation and G(0)/G(1)-S-phase transition by polycyclic aromatic hydrocarbons in human breast carcinoma MCF-7 cells, TOXICOLOGICAL SCIENCES 70, 193-201
• Fulnecek, J., Lim, KY., Leitch, AR., Kovarik, A., Matyasek, R. (2002 ), Evolution and structure of 5S rDNA loci in allotetraploid Nicotiana tabacum and its putative parental species, HEREDITY 88, 19-25
• Bartova, E., Kozubek, S., Jirsova, P., Kozubek, M., Gajova, H., Lukasova, E., Skalnikova, M., Ganova, A., Koutna, I., Hausmann, M. (2002 ), Nuclear structure and gene activity in human differentiated cells, JOURNAL OF STRUCTURAL BIOLOGY 139, 76-89
• Koukalova, B., Votruba, I., Fojtova, M., Holy, A., Kovaik, A. (2002 ), Hypomethylation of CNG targets induced with dihydroxypropyladenine is rapidly reversed in the course of mitotic cell division in tobacco, THEORETICAL AND APPLIED GENETICS 105, 796-801
• Fojta, M., Havran, L., Kizek, R., Billova, S. (2002 ), Voltammetric microanalysis of DNA adducts with osmium tetroxide,2,2 '-bipyridine using a pyrolytic graphite electrode, TALANTA 56, 867-874
• Janovska, E., Novakova, O., Natile, G., Brabec, V. (2002 ), Differential genotoxic effects of antitumor trans-[PtCl2(E-iminoether)(2)] and cisplatin in Escherichia coli, JOURNAL OF INORGANIC BIOCHEMISTRY 90, 155-158
• Lukasova, E., Kozubek, S., Kozubek, M., Falk, M., Amrichova, J. (2002 ), The 3D structure of human chromosomes in cell nuclei, CHROMOSOME RESEARCH 10, 535-548
• Vrana, O., Brabec, V. (2002 ), L-Methionine inhibits reaction of DNA with anticancer cis-diamminedichloroplatinum(II), BIOCHEMISTRY 41, 10994-10999
• Hason, S., Vetterl, V. (2002 ), On the formation kinetics of two-dimensional cytidine films, BIOELECTROCHEMISTRY 57, 23-32
• Hason, S., Dvorak, J., Jelen, F., Vetterl, V. (2002 ), Impedance analysis of DNA and DNA-drug interactions on thin mercury film electrodes, CRITICAL REVIEWS IN ANALYTICAL CHEMISTRY 32, 167-179
• Fulnecek, J., Matyasek, R., Kovarik, A. (2002 ), Distribution of 5-methylcytosine residues in 5S rRNA genes in Arabidopsis thaliana and Secale cereale, MOLECULAR GENETICS AND GENOMICS 268, 510-517
• Falk, M., Lukasova, E., Kozubek, S., Kozubek, M. (2002 ), Topography of genetic elements of X-chromosome relative to the cell nucleus and to the chromosome X territory determined for human lymphocytes, GENE 292, 13-24
• Jagelska, E., Brazda, V., Pospisilova, S., Vojtesek, B., Palecek, E. (2002 ), New ELISA technique for analysis of p53 protein/DNA binding properties, JOURNAL OF IMMUNOLOGICAL METHODS 267, 227-235
• Hofer, M., Pospisil, HM., Znojil, V., Vacek, A., Weiterova, L., Hola, J., Vacha, J. (2002 ), Drugs elevating extracellular adenosine promote regeneration of haematopoietic progenitor cells in severely myelosuppressed mice: their comparison and joint effects with the granulocyte colony-stimulating factor, EUROPEAN JOURNAL OF HAEMATOLOGY 68, 4-11
• Fajkus, J., Simickoval, M., Malaska, J. (2002 ), Tiptoeing to chromosome tips: facts, promises and perils of today's human telomere biology, PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES 357, 545-562
• Pachernik, J., Hampl, A., Soucek, K., Kovarikova, M., Andrysik, Z., Hofmanova, O., Kozubik, A. (2002 ), Multiple biological effects of inhibitors of arachidonic acid metabolism on human keratinocytes, ARCHIVES OF DERMATOLOGICAL RESEARCH 293, 626-633
• Janousek, B., Matsunaga, S., Kejnovsky, E., Ziuvova, J., Vyskot, B. (2002 ), DNA methylation analysis of a male reproductive organ specific gene (MROS1) during pollen development, GENOME 45, 930-938
• Matyasek, R., Fulnecek, J., Lim, KY., Leitch, AR., Kovarik, A. (2002 ), Evolution of 5S rDNA unit arrays in the plant genus Nicotiana (Solanaceae), GENOME 45, 556-562
• Hofer, A., Hoferova, Z., Fedorocko, P., Mackova, NO. (2002 ), Hematopoiesis-Stimulating and anti-tumor effects of repeated administration of diclofenac in mice with transplanted fibrosarcoma cells, PHYSIOLOGICAL RESEARCH 51, 629-632
• Vaculova, A., Hofmanova, J., Soucek, K., Kovarikova, M., Kozubik, A. (2002 ), Tumor necrosis factor-alpha induces apoptosis associated with poly(ADP-ribose) polymerase cleavage in HT-29 colon cancer cells, ANTICANCER RESEARCH 22, 1635-1639
• Lojek, A., Kubala, L., Cizova, H., Ciz, M. (2002 ), A comparison of whole blood neutrophil chemiluminescence measured with cuvette and microtitre plate luminometers, LUMINESCENCE 17, 1-4
• Hofmanova, J., Soucek, K., Pachernik, J., Kovarikova, M., Hoferova, Z., Minksova, K., Netikova, J., Kozubik, A. (2002 ), Lipoxygenase inhibitors induce arrest of tumor cells in S-phase of the cell cycle, NEOPLASMA 49, 362-367
• Pachernik, J., Janik, R., Hofmanova, J., Bryja, V., Kozubik, A. (2002 ), Conditions for gene transfection into the HL-60 human leukaemia cell line by electroporation, FOLIA BIOLOGICA 48, 154-156
• Vacek, A., Hofer, M., Hromas, J., Luksikova, E., Svoboda, J., Schneiderova, H. (2002 ), Hemopoiesis-stimulating effects and enhanced survival of irradiated mice after peroral or intraperitoneal administration of ultrafiltered pig leukocyte extract (UPLE, IMUNOR (R)), IMMUNOPHARMACOLOGY AND IMMUNOTOXICOLOGY 24, 651-664
• Kubala, L., Ciz, M., Soska, V., Cerny, J., Lojek, A. (2002 ), Influence of polysulfone and hemophan hemodialysis membranes on phagocytes, GENERAL PHYSIOLOGY AND BIOPHYSICS 21, 367-380
• Brabec, V., Kasparkova, J. (2002 ), Molecular aspects of resistance to antitumor platinum drugs, DRUG RESISTANCE UPDATES 5, 147-161
• Jelen, F., Yosypchuk, B., Kourilova, A., Novotny, L., Palecek, E. (2002 ), Label-free determination of picogram quantities of DNA by stripping voltammetry with solid copper amalgam or mercury electrodes in the presence of copper, ANALYTICAL CHEMISTRY 74, 4788-4793
• Kozubek, S., Lukasova, E., Jirsova, P., Koutna, I., Kozubek, M., Ganova, A., Bartova, E., Falk, M., Pasekova, R. (2002 ), 3D Structure of the human genome: order in randomness, CHROMOSOMA 111, 321-331
• Fojtova, M., Fulneckova, J., Fajkus, J., Kovarik, A. (2002 ), Recovery of tobacco cells from cadmium stress is accompanied by DNA repair and increased telomerase activity, JOURNAL OF EXPERIMENTAL BOTANY 53, 2151-2158
• Palecek, E., Kizek, R., Havran, L., Billova, S., Fojta, M. (2002 ), Electrochemical enzyme-linked immunoassay in a DNA hybridization sensor, ANALYTICA CHIMICA ACTA 469, 73-83
• Marini, V., Kasparkova, J., Novakova, O., Scolaro, LM., Romeo, R., Brabec, V. (2002 ), Biophysical analysis of natural, double-helical DNA modified by a dinuclear platinum(II) organometallic compound in a cell-free medium, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 7, 725-734
• Palecek, E., Billova, S., Havran, L., Kizek, R., Miculkova, A., Jelen, F. (2002 ), DNA hybridization at microbeads with cathodic stripping voltammetric detection, TALANTA 56, 919-930
• Palecek, E. (2002 ), Past, present and future of nucleic acids electrochemistry, TALANTA 56, 809-819
• Kubala, L., Ciz, M., Vondracek, J., Cerny, J., Nemec, P., Studenik, P., Cizova, H., Lojek, A. (2002 ), Perioperative and postoperative course of cytokines and the metabolic activity of neutrophils in human cardiac operations and heart transplantation, JOURNAL OF THORACIC AND CARDIOVASCULAR SURGERY 124, 1122-1129
• Fojta, M. (2002 ), Electrochemical sensors for DNA interactions and damage, ELECTROANALYSIS 14, 1449-1463
• Palecek, E., Jelen, F. (2002 ), Electrochemistry of nucleic acids and development of DNA sensors, CRITICAL REVIEWS IN ANALYTICAL CHEMISTRY 32, 261-270
• Brabec, V. (2002 ), DNA modifications by antitumor platinum and ruthenium compounds: Their recognition and repair, PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 71 71, 1-68
• Hoferova, Z., Fedorocko, P., Hofmanova, J., Hofer, M., Znojil, V., Minksova, K., Soucek, K., Egyed, A., Kozubik, A. (2002 ), The effect of nonsteroidal anti-inflammatory drugs ibuprofen, flurbiprofen, and diclofenac on in vitro and in vivo growth of mouse fibrosarcoma, CANCER INVESTIGATION 20, 490-498

2001

• Nejedly, K., Kittner, R., Pospisilova, S., Kypr, J. (2001 ), Crosslinking of the complementary strands of DNA by UV light: dependence on the oligonucleotide composition of the UV irradiated DNA, BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1517, 365-375
• Fojtik, P., Vorlickova, M. (2001 ), The fragile X chromosome (GCC) repeat folds into a DNA tetraplex at neutral pH, NUCLEIC ACIDS RESEARCH 29, 4684-4690
• Hofr, C., Farrell, N., Brabec, V. (2001 ), Thermodynamic properties of duplex DNA containing a site-specific d(GpG) intrastrand crosslink formed by an antitumor dinuclear platinum complex, NUCLEIC ACIDS RESEARCH 29, 2034-2040
• Kasparkova, J., Pospisilova, S., Brabec, V. (2001 ), Different recognition of DNA modified by antitumor cisplatin and its clinically ineffective trans isomer by tumor suppressor protein p53, JOURNAL OF BIOLOGICAL CHEMISTRY 276, 16064-16069
• Hofr, C., Brabec, V. (2001 ), Thermal and thermodynamic properties of duplex DNA containing site-specific interstrand cross-link of antitumor cisplatin or its clinically ineffective trans isomer, JOURNAL OF BIOLOGICAL CHEMISTRY 276, 9655-9661
• Bartova, E., Kozubek, S., Jirsova, P., Kozubek, M., Lukasova, E., Skalnikova, M., Cafourkova, A., Koutna, I., Pasekova, R. (2001 ), Higher-order chromatin structure of human granulocytes, CHROMOSOMA 110, 360-370
• Zluvova, J., Janousek, B., Vyskot, B. (2001 ), Immunohistochemical study of DNA methylation dynamics during plant development, JOURNAL OF EXPERIMENTAL BOTANY 52, 2265-2273
• Stefl, R., Trantirek, L., Vorlickova, M., Koca, J., Sklenar, V., Kypr, J. (2001 ), A-like guanine-guanine stacking in the aqueous DNA duplex of d(GGGGCCCC), JOURNAL OF MOLECULAR BIOLOGY 307, 513-524
• Csaszar, K., Spackova, N., Stefl, R., Sponer, J., Leontis, NB. (2001 ), Molecular dynamics of the frame-shifting pseudoknot from beet western yellows virus: The role of non- Watson-Crick base-pairing, ordered hydration, cation binding and base mutations on stability and unfolding, JOURNAL OF MOLECULAR BIOLOGY 313, 1073-1091
• Vacek, A., Tacev, T., Hofer, M. (2001 ), Modulation of radioprotective effects of respiratory hypoxia by changing the duration of hypoxia before irradiation and by combining hypoxia and administration of hemopoiesis-stimulating agents, STRAHLENTHERAPIE UND ONKOLOGIE 177, 474-481
• Malina, J., Novakova, O., Keppler, BK., Alessio, E., Brabec, V. (2001 ), Biophysical analysis of natural, double-helical DNA modified by anticancer heterocyclic complexes of ruthenium(lll) in cell-free media, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 6, 435-445
• Siroky, J., Lysak, MA., Dolezel, J., Kejnovsky, E., Vyskot, B. (2001 ), Heterogeneity of rDNA distribution and genome size in Silene spp., CHROMOSOME RESEARCH 9, 387-393
• Sykorova, E., Fajkus, J., Ito, M., Fukui, K. (2001 ), Transition between two forms of heterochromatin at plant subtelomeres, CHROMOSOME RESEARCH 9, 309-323
• Stros, M. (2001 ), Two mutations of basic residues within the N-terminus of HMG-1 B domain with different effects on DNA supercoiling and binding to bent DNA, BIOCHEMISTRY 40, 4769-4779
• Pospisil, M., Hofer, M., Vacek, A., Netikova, J., Hola, J., Znojil, V., Weiterova, L. (2001 ), Drugs elevating extracellular adenosine enhance cell cycling of hematopoietic progenitor cells as inferred from the cytotoxic effects of 5-fluorouracil, EXPERIMENTAL HEMATOLOGY 29, 557-562
• Nejedly, K., Kittner, R., Kypr, J. (2001 ), Genomic DNA regions whose complementary strands are prone to UV light-induced crosslinking, ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 388, 216-224
• Palecek, E., Brazdova, M., Brazda, V., Palecek, J., Billova, S., Subramaniam, V., Jovin, TM. (2001 ), Binding of p53 and its core domain to supercoiled DNA, EUROPEAN JOURNAL OF BIOCHEMISTRY 268, 573-581
• Fajkusova, L., Lukas, Z., Tvrdikova, M., Kuhrova, V., Hajek, J., Fajkus, J. (2001 ), Novel dystrophin mutations revealed by analysis of dystrophin mRNA: alternative splicing suppresses the phenotypic effect of a nonsense mutation, NEUROMUSCULAR DISORDERS 11, 133-138
• Jirsova, P., Kozubek, S., Bartova, E., Kozubek, M., Lukasova, E., Cafourkova, A., Koutna, L., Skalnikova, M. (2001 ), Spatial distribution of selected genetic loci in nuclei of human leukemia cells after irradiation, RADIATION RESEARCH 155, 311-319
• Kypr, J., Vorlickova, M. (2001 ), Dimethylsulfoxide-stabilized conformer of guanine-adenine repeat strand of DNA, BIOPOLYMERS 62, 81-84
• Vondracek, J., Stika, J., Soucek, K., Minksova, K., Blaha, L., Hofmanova, J., Kozubik, A. (2001 ), Inhibitors of arachidonic acid metabolism potentiate tumour necrosis factor-alpha-induced apoptosis in HL-60 cells, EUROPEAN JOURNAL OF PHARMACOLOGY 424, 1-11
• Kovarik, A., Matzke, MA., Matzke, AJM., Koukalova, B. (2001 ), Transposition of IS10 from the host Escherichia coli genome to a plasmid may lead to cloning artefacts, MOLECULAR GENETICS AND GENOMICS 266, 216-222
• Fajkus, J., Trifonov, EN. (2001 ), Columnar packing of telomeric nucleosomes, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 280, 961-963
• Haring, D., Kypr, J. (2001 ), No isochores in the human chromosomes 21 and 22?, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 280, 567-573
• Hanzalek, P., Kypr, J. (2001 ), Tertiary structures of the Escherichia coli and human chromosome 21 molecules of DNA, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 283, 219-223
• Vorlickova, M., Kejnovska, I., Tumova, M., Kypr, J. (2001 ), Conformational properties of DNA fragments containing GAC trinucleotide repeats associated with skeletal displasias, EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 30, 179-185
• Kypr, J., Fialova, M., Chladkova, J., Tumova, M., Vorlickova, M. (2001 ), Conserved guanine-guanine stacking in tetraplex and duplex DNA, EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 30, 555-558
• Fojtova, M., Kovarik, A., Matyasek, R. (2001 ), Cytosine methylation of plastid genome in higher plants. Fact or artefact?, PLANT SCIENCE 160, 585-593
• Haring, D., Kypr, J. (2001 ), Mosaic structure of the DNA molecules of the human chromosomes 21 and 22, MOLECULAR BIOLOGY REPORTS 28, 9-17
• Cafourkova, A., Lukasova, E., Kozubek, S., Kozubek, M., Govorun, RD., Koutna, I., Bartova, E., Skalnikova, M., Jirsova, P., Pasekova, R., Krasavin, EA. (2001 ), Exchange aberrations among 11 chromosomes of human lymphocytes induced by gamma-rays, INTERNATIONAL JOURNAL OF RADIATION BIOLOGY 77, 419-429
• Lengerova, M., Vyskot, B. (2001 ), Sex chromatin and nucleolar analyses in Rumex acetosa L., PROTOPLASMA 217, 147-153
• Hofer, M., Pospisil, M., Weiterova, L., Znojil, V., Vacha, J., Hola, J., Vacek, A., Pipalova, I. (2001 ), Combination of drugs elevating extracellular adenosine with granulocyte colony-stimulating factor promotes granulopoietic recovery in the murine bone marrow after 5-fluorouracil treatment, PHYSIOLOGICAL RESEARCH 50, 521-524
• Pachernik, J., Soucek, K., Hampl, A., Hofmanova, J., Kozubik, A. (2001 ), Transforming growth factor-beta 1 induces junB mRNA accumulation, G1-phase arrest, and pRb dephosphorylation in human leukemia HL-60 cells, FOLIA BIOLOGICA 47, 32-35
• Vacek, A., Hofer, M., Weiterova, L., Hoferova, Z., Pipalova, I., Masek, K. (2001 ), Hemopoiesis-stimulating action of adamantylamide dipeptide: Kinetics of increase of GM-CFC in femur and co-stimulating activity of serum, role of bone marrow stromal cells, IMMUNOPHARMACOLOGY AND IMMUNOTOXICOLOGY 23, 505-517
• Palecek, E., Fojta, M. (2001 ), Detecting DNA hybridization and damage, ANALYTICAL CHEMISTRY 73, 74A-83A
• Kizek, R., Trnkova, L., Palecek, E. (2001 ), Determination of metallothionein at the femtomole level by constant current stripping chronopotentiometry, ANALYTICAL CHEMISTRY 73, 4801-4807
• Vondracek, J., Sheard, MA., Krejci, P., Minksova, K., Hofmanova, J., Kozubik, A. (2001 ), Modulation of death receptor-mediated apoptosis in differentiating human myeloid leukemia HL-60 cells, JOURNAL OF LEUKOCYTE BIOLOGY 69, 794-802
• Kejnovsky, E., Vrana, J., Matsunaga, S., Soucek, P., Siroky, J., Dolezel, J., Vyskot, B. (2001 ), Localization of male-specifically expressed MROS genes of Silene latifolia by PCR on flow-sorted sex chromosomes and autosomes, GENETICS 158, 1269-1277
• Kejnovska, I., Tumova, M., Vorlickova, M. (2001 ), (CGA)(4): parallel, anti-parallel, right-handed and left-handed homoduplexes of a trinucleotide repeat DNA, BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS 1527, 73-80

2000

• Koutna, I., Kozubek, S., Zaloudik, J., Kozubek, M., Lukasova, E., Matula, P., Bartova, E., Skalnikova, M., Cafourkova, A., Jirsova, P. (2000 ), Topography of genetic loci in tissue samples: towards new diagnostic tool using interphase FISH and high-resolution image analysis techniques, ANALYTICAL CELLULAR PATHOLOGY 20, 173-185
• Fojta, M., Kubicarova, T., Palecek, E. (2000 ), Electrode potential-modulated cleavage of surface-confined DNA by hydroxyl radicals detected by an electrochemical biosensor, BIOSENSORS & BIOELECTRONICS 15, 107-115
• Stros, M., Muselikova, E. (2000 ), A role of basic residues and the putative intercalating phenylalanine of the HMG-1 box B in DNA supercoiling and binding to four-way DNA junctions, JOURNAL OF BIOLOGICAL CHEMISTRY 275, 35699-35707
• Fojtova, M., Kovarik, A. (2000 ), Genotoxic effect of cadmium is associated with apoptotic changes in tobacco cells, PLANT CELL AND ENVIRONMENT 23, 531-537
• Malina, J., Hofr, C., Maresca, L., Natile, G., Brabec, V. (2000 ), DNA interactions of antitumor cisplatin analogs containing enantiomeric amine ligands, BIOPHYSICAL JOURNAL 78, 2008-2021
• Novakova, O., Hofr, C., Brabec, V. (2000 ), Modification of natural, double-helical DNA by antitumor cis- and trans-[Cl-2(Me2SO4)(4)Ru] in cell-free media, BIOCHEMICAL PHARMACOLOGY 60, 1761-1771
• Kovarikova, M., Pachernik, J., Hofmanova, J., Zadak, Z., Kozubik, A. (2000 ), TNF-alpha modulates the differentiation induced by butyrate in the HT-29 human colon adenocarcinoma cell line, EUROPEAN JOURNAL OF CANCER 36, 1844-1852
• Kovarik, A., Van Houdt, H., Holy, A., Depicker, A. (2000 ), Drug-induced hypomethylation of a posttranscriptionally silenced transgene locus of tobacco leads to partial release of silencing, FEBS LETTERS 467, 47-51
• Kozubek, S., Lukasova, E., Amrichova, J., Kozubek, M., Liskova, A., Slotova, J. (2000 ), Influence of cell fixation on chromatin topography, ANALYTICAL BIOCHEMISTRY 282, 29-38
• Kovarik, A., Koukalova, B., Lim, KY., Matyasek, R., Lichtenstein, CP., Leitch, AR., Bezdek, M. (2000 ), Comparative analysis of DNA methylation in tobacco heterochromatic sequences, CHROMOSOME RESEARCH 8, 527-541
• Skalnikova, M., Kozubek, S., Lukasova, E., Bartova, E., Jirsova, P., Cafourkova, A., Koutna, I., Kozubek, M. (2000 ), Spatial arrangement of genes, centromeres and chromosomes in human blood cell nuclei and its changes during the cell cycle, differentiation and after irradiation, CHROMOSOME RESEARCH 8, 487-499
• Kostrhunova, H., Brabec, V. (2000 ), Conformational analysis of site-specific DNA cross-links of cisplatin-distamycin conjugates, BIOCHEMISTRY 39, 12639-12649
• Stros, M., Cherny, D., Jovin, TM. (2000 ), HMG1 protein stimulates DNA end joining by promoting association of DNA molecules via their ends, EUROPEAN JOURNAL OF BIOCHEMISTRY 267, 4088-4097
• Hofer, M., Mazur, L., Pospisil, M., Weiterova, L., Znojil, V. (2000 ), Radioprotective action of extracellular adenosine on bone marrow cells in mice exposed to gamma rays as assayed by the micronucleus test, RADIATION RESEARCH 154, 217-221
• Jelen, F., Vetterl, V., Belusa, P., Hason, S. (2000 ), Adsorptive stripping analysis of DNA with admittance detection, ELECTROANALYSIS 12, 987-992
• Fojta, M., Havran, L., Fulneckova, J., Kubicarova, T. (2000 ), Adsorptive transfer stripping AC voltammetry of DNA complexes with intercalators, ELECTROANALYSIS 12, 926-934
• Kubicarova, T., Fojta, M., Vidic, J., Havran, L., Palecek, E. (2000 ), Mercury film electrode as a sensor for the detection of DNA damage, ELECTROANALYSIS 12, 1422-1425
• Kubicarova, T., Fojta, M., Vidic, J., Tomschik, M., Suznjevic, D., Palecek, E. (2000 ), Voltammetric and chronopotentiometric measurements with nucleic acid-modified mercury film on a glassy carbon electrode, ELECTROANALYSIS 12, 1390-1396
• Haring, D., Kypr, J. (2000 ), Escherichia coli genome is composed of two distinct types of nucleotide sequences, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 272, 571-575
• Brazda, V., Palecek, J., Pospisilova, S., Vojtesek, B., Palecek, E. (2000 ), Specific modulation of p53 binding to consensus sequence within supercoiled DNA by monoclonal antibodies, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 267, 934-939
• Bartova, E., Kozubek, S., Kozubek, M., Jirsova, P., Lukasova, E., Skalnikova, M., Cafourkova, A., Koutna, I. (2000 ), Nuclear topography of the c-myc gene in human leukemic cells, GENE 244, 1-11
• Bartova, E., Kozubek, S., Kozubek, M., Jirsova, P., Lukasova, E., Skalnicova, M., Buchnickova, K. (2000 ), The influence of the cell cycle, differentiation and irradiation on the nuclear location of the abl, bcr and c-myc genes in human leukemic cells, LEUKEMIA RESEARCH 24, 233-241
• Weiterova, L., Hofer, M., Pospisil, M., Znojil, V., Vacha, J., Vacek, A., Pipalova, I. (2000 ), Influence of the joint treatment with granulocyte colony-stimulating factor and drugs elevating extracellular adenosine on erythropoietic recovery following 5-fluorouracil-induced haematotoxicity in mice, EUROPEAN JOURNAL OF HAEMATOLOGY 65, 310-316
• Hofer, M., Vacek, A., Masek, K., Juchelkova, L., Pipalova, I. (2000 ), Adamantylamide dipeptide stimulates hematopoiesis and increases survival in irradiated mice, INTERNATIONAL JOURNAL OF IMMUNOPHARMACOLOGY 22, 91-97
• Vacek, A., Hofer, M., Barnet, K., Cech, K., Pekarek, J., Schneiderova, H. (2000 ), Positive effects of dialyzable leukocyte extract (DLE) on recovery of mouse haemopoiesis suppressed by ionizing radiation and on proliferation of haemopoietic progenitor cells in vitro, INTERNATIONAL JOURNAL OF IMMUNOPHARMACOLOGY 22, 623-634
• Hofmanova, J., Soucek, K., Dusek, L., Netikova, J., Kozubik, A. (2000 ), Inhibition of cytochrome P-450 modulates all-trans-retinoic acid-induced differentiation and apoptosis of HL-60 cells, CANCER DETECTION AND PREVENTION 24, 325-342
• Horakova, M., Fajkus, J. (2000 ), TAS49-a dispersed repetitive sequence isolated from subtelomeric regions of Nicotiana tomentosiformis chromosomes, GENOME 43, 273-284
• Janousek, B., Zluvova, J., Vyskot, B. (2000 ), Histone H4 acetylation and DNA methylation dynamics during pollen development, PROTOPLASMA 211, 116-122
• Neugebauerova, S., Kypr, J. (2000 ), Invariant and variable base stacking geometries in B-DNA and A-DNA, JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 18, 73-81
• Hofmanova, J., Machala, M., Kozubik, A. (2000 ), Epigenetic mechanisms of the carcinogenic effects of xenobiotics and in vitro methods of their detection, FOLIA BIOLOGICA 46, 165-173
• Vacek, A. (2000 ), Proliferation activity and number of stromal (CFU-f) and haemopoietic (CFUs) stem cells in bone marrow and spleen of rats of different ages, ACTA VETERINARIA BRNO 69, 25-31
• Kasparkova, J., Farrell, N., Brabec, V. (2000 ), Sequence specificity, conformation, and recognition by HMG1 protein of major DNA interstrand cross-links of antitumor dinuclear platinum complexes, JOURNAL OF BIOLOGICAL CHEMISTRY 275, 15789-15798
• Trantirek, L., Stefl, R., Vorlickova, M., Koca, J., Sklenar, V., Kypr, J. (2000 ), An A-type double helix of DNA having B-type puckering of the deoxyribose rings, JOURNAL OF MOLECULAR BIOLOGY 297, 907-922
• Brabec, V., Neplechova, K., Kasparkova, J., Farrell, N. (2000 ), Steric control of DNA interstrand cross-link sites of trans platinum complexes: specificity can be dictated by planar nonleaving groups, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 5, 364-368
• Fajkusova, L., Fajkus, J., Polackova, K., Fulnecek, J., Dvorakova, D., Krahulcova, E. (2000 ), Detailed mapping of methylcytosine positions at the CpG island surrounding the Pa promoter at the bcr-abl locus in CML patients and in two cell lines, K562 and BV173, BLOOD CELLS MOLECULES AND DISEASES 26, 193-204
• Malaska, J., Sklenickova, M., Krejci, K., Fajkusova, L., Bajer, M., Hrstkova, H., Fajkus, J. (2000 ), Telomerase activity and expression and telomere analysis in situ in the course of treatment of childhood leukemias, BLOOD CELLS MOLECULES AND DISEASES 26, 534-539